Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 621 a.a., Transcription termination factor Rho from Xanthomonas campestris pv. campestris strain 8004

 Score =  628 bits (1620), Expect = 0.0
 Identities = 316/418 (75%), Positives = 370/418 (88%), Gaps = 1/418 (0%)

Query: 2   NLTELKQKPITDLLEMAEQMGI-ENMARSRKQDVIFALLKKHAKSGEEISGDGVLEILQD 60
           +L++LK+ P   LL++A+Q+ I E +AR+RKQDVIFALLK   + GE ++ DGVLEIL D
Sbjct: 204 SLSDLKRMPAQKLLDIADQLNIQEGVARARKQDVIFALLKVLTRHGEGVAADGVLEILPD 263

Query: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120
           GFGFLR+A+ASYLAGPDD Y+SPSQIRRFNLRTGD + G+IR PK+GERYFAL  VDTIN
Sbjct: 264 GFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRIRFPKDGERYFALSIVDTIN 323

Query: 121 FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180
            +  E +KNK+LFENLTPLFP +R ++E G+GSTED+TGR++DL AP GKGQR LIV+PP
Sbjct: 324 GEPLEASKNKVLFENLTPLFPRRRFRLERGDGSTEDITGRILDLMAPQGKGQRALIVSPP 383

Query: 181 KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240
           KAGKT+M+Q +A  IT N+PE H+IVLLIDERPEEVTEMQRTVRGEV++STFDEP  RHV
Sbjct: 384 KAGKTMMMQQVATAITTNHPEVHMIVLLIDERPEEVTEMQRTVRGEVISSTFDEPAARHV 443

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300
           QVAEMVIE+AKRLVEHKKDVVILLDSITRLARAYN V+PSSGKVLTGGVDA+AL +PKRF
Sbjct: 444 QVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRF 503

Query: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360
           FGAARN+EEGGSLTIIATALVETGSKMDEVIYEEFKGTGN E+ L+RRI EKRV+PAI+I
Sbjct: 504 FGAARNVEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNSEVHLNRRITEKRVYPAIDI 563

Query: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKQTKTNDEFFLSMKR 418
           NRSGTRRE+LL   + LQ++WILRKLLHPMDEIAA+EFL+DK+K TK+NDEFF SMKR
Sbjct: 564 NRSGTRREDLLIEPELLQKIWILRKLLHPMDEIAAMEFLLDKMKTTKSNDEFFSSMKR 621