Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 442 a.a., flagellum-specific ATP synthase FliI from Phaeobacter inhibens DSM 17395

 Score = 80.9 bits (198), Expect = 7e-20
 Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 18/238 (7%)

Query: 161 VIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQ 220
           V +   PI KGQR  + A    GK+ +L  +A N+  +     +++ LI ER  EV    
Sbjct: 149 VFNTILPIVKGQRVGLFAGSGVGKSTLLATLAQNMEADV----VVIALIGERGREVNHFV 204

Query: 221 RTVRGE-------VVASTFDEPPTRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARA 273
           + V G+       VVA+T D+      + A   +  A+   +  K+V+ L DS+TR A A
Sbjct: 205 KDVLGDEGMQRAVVVAATSDQSALVRRRCAWSAMAVAEHFRDQGKNVLFLADSVTRFAEA 264

Query: 274 YNTVIPSSGKVLTGGVDAHALEKPKRFFGAARNIEEG----GSLTIIATALVETGSKMDE 329
           +  +  SSG+     +  +         G       G    G +T I + LV  GS MDE
Sbjct: 265 HREIAVSSGEA--PALRGYPPSVTPLITGLCERAGPGSGDQGDITAIFSVLV-AGSDMDE 321

Query: 330 VIYEEFKGTGNMELPLDRRIAEKRVFPAININRSGTRREELLTADDELQRMWILRKLL 387
            I +  +G  +  + L+R IAE+  FPA++++RS +R        DE   +  +RK L
Sbjct: 322 PIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRSLPAAATADENSAILDVRKYL 379