Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 437 a.a., flagellum-specific ATP synthase FliI (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 17/265 (6%)

Query: 121 FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTE-DLTGRVIDLCAPIGKGQRGLIVAP 179
           F  P +    ++ E   PL+ +    +      T  D+  R I+    +G+GQR  I+A 
Sbjct: 108 FGAPLDGGTPVMPEAWAPLYASPPNPLTRPRIDTPLDVGVRCINSLLTLGRGQRVGIMAG 167

Query: 180 PKAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRT-------VRGEVVASTF 232
              GK+ ++  +A    R       ++ LI ER  EV E            R  +V +T 
Sbjct: 168 SGVGKSTLMGMMA----RYTEAQVNVIGLIGERGREVVEFMEKDLGPEGMARSVLVVATS 223

Query: 233 DEPPTRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLT--GGVD 290
           D+ P   ++ A      A+   +  KDV++++DS+TR A A   V  + G+  T  G   
Sbjct: 224 DQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTP 283

Query: 291 AHALEKPKRFFGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIA 350
               + P+    A R+ E  G++T I T LV+ G   +E I +  +   +  + L R +A
Sbjct: 284 TVFAQLPRLLERAGRSPE--GTITGIYTVLVD-GDDFNEPIADAVRSILDGHIVLTRELA 340

Query: 351 EKRVFPAININRSGTRREELLTADD 375
           ++  FPAI++ +S +R    +  DD
Sbjct: 341 DQGHFPAIDVLKSISRLRTDICPDD 365