Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 442 a.a., type III secretion system ATPase from Burkholderia phytofirmans PsJN

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 14/222 (6%)

Query: 153 STEDLTG-RVIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIAANITRNNPECHLIVLLIDE 211
           ST   TG RVID     G GQR  I A    GK+ ++  IA   + +     ++V LI E
Sbjct: 143 STPFPTGVRVIDGLLSCGVGQRVGIFAAAGGGKSTLMGMIANGASVDA----IVVALIGE 198

Query: 212 RPEEVTEM------QRTVRGEVVASTFDEPPTRHVQVAEMVIEKAKRLVEHKKDVVILLD 265
           R  EV E        R     V+AST + P    ++ AE+    A  L    K V++L D
Sbjct: 199 RGREVGEFIHDHLGARRASSIVIASTSERPAAERIKAAELACRVASDLRAEGKHVLLLFD 258

Query: 266 SITRLARAYNTVIPSSGK-VLTGGVDAHALEKPKRFFGAARNIEEGGSLTIIATALVETG 324
           S+TR ARA   V  + G+  +  G       +  R    A  +   G++T   T L E  
Sbjct: 259 SLTRYARALREVGLAVGEPPVRRGYPPRVFAELPRLIETA-GLTRQGAVTAFFTVLAE-D 316

Query: 325 SKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAININRSGTR 366
            +M + + EE +   +  + L  R+     +PAI++ +S +R
Sbjct: 317 EEMSDPVAEEARSLLDGHIQLSGRLGGAGHYPAIDVLKSKSR 358