Pairwise Alignments

Query, 488 a.a., 3-octaprenyl-4-hydroxybenzoate carboxy-lyase from Pseudomonas putida KT2440

Subject, 425 a.a., UbiD family decarboxylase from Methanococcus maripaludis JJ

 Score =  119 bits (297), Expect = 3e-31
 Identities = 94/336 (27%), Positives = 155/336 (46%), Gaps = 13/336 (3%)

Query: 120 KVVKDAVCQEVVVEGDDVDLGTLPIQHCWPGDVAPLITWGLTVTRGPNKDRQNLGIYRQQ 179
           +++ D   +++ ++ D   +   PI   +  D  P +T G+ + +  ++   N  I+R  
Sbjct: 81  ELIVDESLEKLYIDDDLEKIHEYPIPTYYGKDAGPYLTSGVVIVKDKDEG-VNASIHRIL 139

Query: 180 VIGRNKVIMRWLSHRGGALDYREWCEKNPGQ-PFPVAVALGADPATILGAVTPVPDTLSE 238
           V     + +R +  R     Y     KN G      A+ +G  PA +L A T    + +E
Sbjct: 140 VRPDGNLAIRMVEQRHLHYIYN----KNIGNGEVDCAIVIGVHPAVLLAASTSGDVSFNE 195

Query: 239 YAFAGLLRGNRTELVKCRGSNLQVPATAEIILEGVIHPGEMAPEGPYGDHTGYYNEVDSF 298
             +A  L      LVKC+  +L+VP  AE I+E  I   EM  EGP+ D TG Y+ +   
Sbjct: 196 LKYASALMNKPLNLVKCKTVDLEVPE-AEFIIEAKI-TAEMVDEGPFVDITGTYDVIRKQ 253

Query: 299 PVFTVERITHRQKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGC 358
           P+  V  +  ++  I+H+   G   +   ++G+         ++   P + +  L   GC
Sbjct: 254 PLIKVTALRRKEDAIFHALLPGGS-EHKLLMGIPQEPRMYKGIRNTVPSLKNVALTQGGC 312

Query: 359 SYRMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRM 418
            +  AVV++ K+  G  K  +L     L      K V V DDDIN  D NDV +A+ TR+
Sbjct: 313 CWLNAVVSIDKKTEGDGKNAILAA---LAAHPSLKHVTVVDDDINIYDANDVEYAVATRV 369

Query: 419 DPKRDTVMIDNTPIDYLD-FASPVSGLGSKMGLDAT 453
              +D ++I       LD  A   + L +KMG+DAT
Sbjct: 370 QSDKDIIIIPGAKGSSLDPSADHKNKLTAKMGIDAT 405