Pairwise Alignments

Query, 488 a.a., 3-octaprenyl-4-hydroxybenzoate carboxy-lyase from Pseudomonas putida KT2440

Subject, 488 a.a., conserved hypothetical protein TIGR00148 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  771 bits (1992), Expect = 0.0
 Identities = 358/487 (73%), Positives = 415/487 (85%)

Query: 1   MQYRDLRDFIRGLEQRGELKRIQVPISPVLEMTEVCDRTLRAKGPALLFEKPTGFDIPVL 60
           M ++DLR FI  LE  GELKRI  P+ P LEMTE+ DR LRA+GPALLFE PT   +PVL
Sbjct: 1   MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAQGPALLFENPTNHSMPVL 60

Query: 61  GNLFGTPERVAMGMGAESVSELREIGKLLAFLKEPEPPKGLKDAWSKLPIFKKVVSMAPK 120
            NLFGTP+RVAM +G +    LRE+G+LLAFLKEPEPP+G KDA SK+P+FK+ ++M PK
Sbjct: 61  ANLFGTPKRVAMALGKDDPLALREVGELLAFLKEPEPPRGFKDAISKIPMFKQALNMPPK 120

Query: 121 VVKDAVCQEVVVEGDDVDLGTLPIQHCWPGDVAPLITWGLTVTRGPNKDRQNLGIYRQQV 180
            V++  CQ+VV  GDDVDL  LPIQHCWPGDVAPL+TWGLT+T+GP K RQNLGIYRQQ+
Sbjct: 121 TVRNPACQQVVKTGDDVDLTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQL 180

Query: 181 IGRNKVIMRWLSHRGGALDYREWCEKNPGQPFPVAVALGADPATILGAVTPVPDTLSEYA 240
           +G+NK+IMRWLSHRGGALD+ ++ E+ PG+ +PV VALG+DP TILGAVTPVPD +SEYA
Sbjct: 181 LGKNKLIMRWLSHRGGALDFADFKEQFPGERYPVVVALGSDPVTILGAVTPVPDAMSEYA 240

Query: 241 FAGLLRGNRTELVKCRGSNLQVPATAEIILEGVIHPGEMAPEGPYGDHTGYYNEVDSFPV 300
           FAGLLRG RTE+ K    +L+VPA++EIILEG I P EMA EGPYGDHTGYYNE D FPV
Sbjct: 241 FAGLLRGERTEVCKALSCDLEVPASSEIILEGYIDPNEMAEEGPYGDHTGYYNETDKFPV 300

Query: 301 FTVERITHRQKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSY 360
           FTV  ITHR+ PIYHSTYTGRPPDEPA+LGVALNEVFVPIL+KQ+PEI DFYLPPEGCSY
Sbjct: 301 FTVTHITHRKDPIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSY 360

Query: 361 RMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP 420
           RMAV++++KQYPGHAKRVM+G WSFLRQFMYTKF++V DDD+N RDWNDVIWAITTRMDP
Sbjct: 361 RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWNDVIWAITTRMDP 420

Query: 421 KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDEAVTRRIDE 480
           KRDTVMIDNTPIDYLDFASPV GLGSKMGLDAT+KW GET REWG  IV D  V ++ID 
Sbjct: 421 KRDTVMIDNTPIDYLDFASPVVGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDS 480

Query: 481 LWDQLGI 487
           +WD+LGI
Sbjct: 481 IWDELGI 487