Pairwise Alignments
Query, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440
Subject, 580 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Score = 224 bits (571), Expect = 1e-62
Identities = 126/290 (43%), Positives = 173/290 (59%), Gaps = 8/290 (2%)
Query: 218 RLLAAGPSHELAAVTSSGKLDDAFTHYQGAGKAQHQPLAIPPR--QATDGPVAIEAHDLT 275
R +A + L+A +S + +DAF G G LA R TD IEAH LT
Sbjct: 280 RAIAGLDAGALSAKPTSPRFEDAFVDMLGGGPGGRSKLAEVARTLDTTDPKPVIEAHGLT 339
Query: 276 LRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASLLGRPVDAS 335
RFGDFTA + ++FAI RG+IFG LG NG GK+TT K+L GL+ + G + G +
Sbjct: 340 KRFGDFTAADDITFAIPRGQIFGLLGPNGAGKSTTFKMLCGLLKPTAGEGRVSGYDLRRE 399
Query: 336 DLATRKRVGFMSQSFSLYGELSTRQNLALHARLFDLPKAESAQRIDELIERFDLAAIADQ 395
R ++G+M+Q FSLYG+LS QNL A ++ L A +RI L E FD
Sbjct: 400 SAQARNQLGYMAQKFSLYGDLSVAQNLEFFAGVYGLAGAHKTERIALLGEVFDFGPYGAM 459
Query: 396 PSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSREQGVTIFL 455
+ LPLG++QRL+LA AV+H P L LDEPTSGVDP R +FW + L E+G+T+ +
Sbjct: 460 SAKDLPLGIKQRLALACAVIHEPAALFLDEPTSGVDPITRREFWTHINALV-EKGITVLV 518
Query: 456 STHFMNEAQRCDRISLMHAGRVLACDTPDALQ-----HQYQGDTLEDAFV 500
+THFM+EA+ CDRI+L++ GR +A +P AL+ + T+EDAF+
Sbjct: 519 TTHFMDEAEYCDRIALIYHGRSIALGSPGALKARVATPEAPDPTMEDAFI 568
Score = 166 bits (421), Expect = 3e-45
Identities = 98/229 (42%), Positives = 136/229 (59%), Gaps = 7/229 (3%)
Query: 1 MNAPALLAEGISHRYGDLI-ALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQ 59
M+ + +S R+G AL L + G L+GPDGAGK+TLL L+ G+
Sbjct: 1 MSEDCIRLSDVSKRFGSAAPALDHLSGRVGGGEITGLVGPDGAGKTTLLRLMTGLMVPDS 60
Query: 60 GELQVLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQ 119
G ++VLG RR L ++ +MPQ G LY +LS+ EN+ +A + GL +
Sbjct: 61 GSIEVLG--FDTRREPAGLQAQIGYMPQRFG--LYEDLSVQENLDLYADMRGLALVDRPA 116
Query: 120 RMANLLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRF 179
A LL+ TDL F R AGKLSGGMKQKLGL CAL+ +P LL+LDEP GVDP+SRR
Sbjct: 117 AFAELLRFTDLARFTGRLAGKLSGGMKQKLGLACALLKKPRLLLLDEPGVGVDPISRRDL 176
Query: 180 WELVEQVRAQRPQLTLLVATAYMEEAEQFEHCLMLDGGRLLAAGPSHEL 228
W +V + + ++ +TAY+EEAE + L+L+GG+LL AGP ++
Sbjct: 177 WAMVRDL--TKDGTGVVWSTAYLEEAEACDRVLLLNGGKLLFAGPPADM 223
Score = 149 bits (376), Expect = 5e-40
Identities = 80/225 (35%), Positives = 132/225 (58%), Gaps = 2/225 (0%)
Query: 269 IEAHDLTLRFGDFT-AVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASL 327
I D++ RFG A++ +S +G GEI G +G +G GKTT ++++TGLM GS +
Sbjct: 6 IRLSDVSKRFGSAAPALDHLSGRVGGGEITGLVGPDGAGKTTLLRLMTGLMVPDSGSIEV 65
Query: 328 LGRPVDASDLATRKRVGFMSQSFSLYGELSTRQNLALHARLFDLPKAESAQRIDELIERF 387
LG + ++G+M Q F LY +LS ++NL L+A + L + EL+
Sbjct: 66 LGFDTRREPAGLQAQIGYMPQRFGLYEDLSVQENLDLYADMRGLALVDRPAAFAELLRFT 125
Query: 388 DLAAIADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSR 447
DLA + +G L G++Q+L LA A+L +P +L+LDEP GVDP +R D W ++ +L++
Sbjct: 126 DLARFTGRLAGKLSGGMKQKLGLACALLKKPRLLLLDEPGVGVDPISRRDLWAMVRDLTK 185
Query: 448 EQGVTIFLSTHFMNEAQRCDRISLMHAGRVLACDTPDALQHQYQG 492
+ G + ST ++ EA+ CDR+ L++ G++L P ++ + G
Sbjct: 186 D-GTGVVWSTAYLEEAEACDRVLLLNGGKLLFAGPPADMRERVTG 229
Score = 147 bits (371), Expect = 2e-39
Identities = 90/255 (35%), Positives = 141/255 (55%), Gaps = 11/255 (4%)
Query: 4 PALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQ 63
P + A G++ R+GD A + F++P G L+GP+GAGKST ++ G+ + GE +
Sbjct: 331 PVIEAHGLTKRFGDFTAADDITFAIPRGQIFGLLGPNGAGKSTTFKMLCGLLKPTAGEGR 390
Query: 64 VLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQRMAN 123
V G +R R ++ +M Q +LY +LS+++N+ FFA ++GL +R+A
Sbjct: 391 VSGYDLR--RESAQARNQLGYMAQKF--SLYGDLSVAQNLEFFAGVYGLAGAHKTERIAL 446
Query: 124 LLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWELV 183
L + D + A L G+KQ+L L CA+IHEP L LDEPT+GVDP++RR FW +
Sbjct: 447 LGEVFDFGPYGAMSAKDLPLGIKQRLALACAVIHEPAALFLDEPTSGVDPITRREFWTHI 506
Query: 184 EQVRAQRPQLTLLVATAYMEEAEQFEHCLMLDGGRLLAAGPSHELAAVTSSGK-----LD 238
+ +T+LV T +M+EAE + ++ GR +A G L A ++ + ++
Sbjct: 507 NAL--VEKGITVLVTTHFMDEAEYCDRIALIYHGRSIALGSPGALKARVATPEAPDPTME 564
Query: 239 DAFTHYQGAGKAQHQ 253
DAF GA A Q
Sbjct: 565 DAFIALIGASGAGGQ 579