Pairwise Alignments

Query, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

Subject, 322 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis JJ

 Score =  153 bits (386), Expect = 2e-41
 Identities = 78/213 (36%), Positives = 126/213 (59%), Gaps = 1/213 (0%)

Query: 268 AIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASL 327
           AIE  +L  +F    AVN VSF + +GEIF FLG NG GK+TT+ +LT L+ ++ GSA +
Sbjct: 3   AIEVKNLVKKFDTNVAVNNVSFNVDKGEIFAFLGPNGAGKSTTINILTTLLKSTSGSAVI 62

Query: 328 LGRPVDASDLATRKRVGFMSQSFSLYGELSTRQNLALHARLFDLPKAESAQRIDELIERF 387
            G          RK +G + Q  +L  +L+  +NL +H +++         RI+EL+E  
Sbjct: 63  SGFDASKDPKKVRKTIGIVFQDSTLDNQLTAYENLYIHGKIYGYKGEALKNRIEELLEFV 122

Query: 388 DLAAIADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSR 447
           +L    D+       G+ +RL +A +++H PEVL LDEPT G+DP  R   W  + ++  
Sbjct: 123 ELLDFKDKIVKNFSGGMVRRLEIARSLIHEPEVLFLDEPTIGLDPQTRSHIWEYIKKMQT 182

Query: 448 EQGVTIFLSTHFMNEAQ-RCDRISLMHAGRVLA 479
           +  +TIFL+TH+M EA+   D+++++  G+++A
Sbjct: 183 KNNMTIFLTTHYMEEAELLADKVAIIDNGKIIA 215



 Score =  112 bits (281), Expect = 3e-29
 Identities = 63/231 (27%), Positives = 121/231 (52%), Gaps = 6/231 (2%)

Query: 5   ALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQV 64
           A+  + +  ++   +A++ + F++  G   A +GP+GAGKST + ++  + +   G   +
Sbjct: 3   AIEVKNLVKKFDTNVAVNNVSFNVDKGEIFAFLGPNGAGKSTTINILTTLLKSTSGSAVI 62

Query: 65  LGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQRMANL 124
            G    +   +      + F    L N    +L+  EN+     ++G      + R+  L
Sbjct: 63  SGFDASKDPKKVRKTIGIVFQDSTLDN----QLTAYENLYIHGKIYGYKGEALKNRIEEL 118

Query: 125 LQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWELVE 184
           L+  +L  F  +     SGGM ++L +  +LIHEP++L LDEPT G+DP +R   WE ++
Sbjct: 119 LEFVELLDFKDKIVKNFSGGMVRRLEIARSLIHEPEVLFLDEPTIGLDPQTRSHIWEYIK 178

Query: 185 QVRAQRPQLTLLVATAYMEEAEQF-EHCLMLDGGRLLAAGPSHELAAVTSS 234
           +++ +   +T+ + T YMEEAE   +   ++D G+++A G  +EL  +  +
Sbjct: 179 KMQTKN-NMTIFLTTHYMEEAELLADKVAIIDNGKIIAEGIVNELKKIVGN 228