Pairwise Alignments

Query, 319 a.a., putative translation-related protein from Pseudomonas putida KT2440

Subject, 358 a.a., Multidrug resistance efflux pump from Pseudomonas stutzeri RCH2

 Score =  236 bits (602), Expect = 6e-67
 Identities = 141/341 (41%), Positives = 204/341 (59%), Gaps = 37/341 (10%)

Query: 13  LIALLAAAGGLGYWKSLH-DQLPEGLSMGNGRLEATEVQIASKIPGRLAEVLVDEGDNVI 71
           L+AL+    GL  W  L  D L EG + GNGR+EATE+ +A+K+ GR+ E+ VDEGD V 
Sbjct: 16  LVALVVI--GLLAWSELRTDGLGEGFASGNGRIEATEIDVATKLGGRIREISVDEGDFVQ 73

Query: 72  RGQLLARIDTRTMEAQRSQAEAEVLRARENYAAAQASVQLRQSE--------------LL 117
            GQ++AR+DT  ++AQ +QA A+V +A      AQA V  R+SE              L 
Sbjct: 74  PGQVIARMDTEVLDAQLNQARAQVRQAENAILTAQALVTQRESEKATAEAVVLQRRAELT 133

Query: 118 LASQELKRVREIFQRKFASQQLLDQQQARFDTANAA--------------VVAARAQLAA 163
            A +  +R   +  R    +Q LD   A   +A AA              + AAR+Q+  
Sbjct: 134 AAQKRHQRTETLVGRNALPRQQLDDDLAAMQSAQAALAASRSQVLSADAGIAAARSQVIE 193

Query: 164 IKAAIGAAEAQVAQLTSEIDDSSLRAPINGIIQLRLAEPGEVLGAGGRVLMLIDPSDQYM 223
            ++A+ AA+A V +L ++I DS L+      +Q R+A+PGEVLGAGG++L L+D +D YM
Sbjct: 194 AQSALEAAQASVVRLQADITDSELKTDRVARVQYRVAQPGEVLGAGGKLLNLVDLADVYM 253

Query: 224 NLYLPASTSGRLTVGDQARIVLDALPERALPAKVAFVAAKAQFTPKQVETRDERQKLVFR 283
             +LP   +GR+ +G + R+V+DA P+  +PAKV +VA+ AQFTPK VET  ER+KL+FR
Sbjct: 254 TFFLPERQAGRVAMGSEVRLVIDAAPQYVIPAKVTYVASVAQFTPKTVETESEREKLMFR 313

Query: 284 VKLRLSDPGA----VPQAKPGMPGAGYVR-TAEVDWPANLQ 319
           VK R+ DP      + Q K G+PG  Y++  A+ +WPA+LQ
Sbjct: 314 VKARI-DPELLRKHMEQVKTGLPGMAYLKLDADAEWPAHLQ 353