Pairwise Alignments

Query, 319 a.a., putative translation-related protein from Pseudomonas putida KT2440

Subject, 304 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  106 bits (265), Expect = 6e-28
 Identities = 65/268 (24%), Positives = 134/268 (50%), Gaps = 9/268 (3%)

Query: 42  GRLEATEVQIASKIPGRLAEVLVDEGDNVIRGQLLARIDTRTMEAQRSQAEAEVLRAREN 101
           G  EATEV ++++  G+L ++ V+EG  +  G+ +  +DT  +  ++ Q EA +      
Sbjct: 31  GTFEATEVIVSAEAAGKLLQLEVEEGTRLKAGEEVGLVDTVQLYLKKLQLEASMKSVESQ 90

Query: 102 YAAAQASVQLRQSELLLASQELKRVREIFQRKFASQQLLDQQQARFDTANAAVVAARAQL 161
                  +   + ++  A +E KRV  +     A+Q+ LD   A+       ++A  + L
Sbjct: 91  RPDLAKQIAATKQQITTAQREKKRVENLLAAGAANQKQLDDWDAQVTLLQQQLIAQESSL 150

Query: 162 AAIKAAI----GAAEAQVAQLTSEIDDSSLRAPINGIIQLRLAEPGEVLGAGGRVLMLID 217
                ++     +   QVAQ+  +++   +++PI G +  + AE GE+   G  +  + +
Sbjct: 151 MKSTNSLTEQGNSVSIQVAQVEDQLNKCHIQSPIEGTVLAKYAEGGELASVGKPLFKVGE 210

Query: 218 PSDQYMNLYLPASTSGRLTVGDQARIVLD--ALPERALPAKVAFVAAKAQFTPKQVETRD 275
               Y+  Y+ +    ++ +GD+  +  D     ++A P  V +++ +++FTPK + T++
Sbjct: 211 VDRMYLRAYVTSEQLSQVKLGDKVTVYSDYGNSEQKAYPGVVTWISDRSEFTPKTILTKN 270

Query: 276 ERQKLVFRVKLRLSDPGAVPQAKPGMPG 303
           ER  LV+ VK+ + + G++   K GM G
Sbjct: 271 ERANLVYAVKIAVKNDGSL---KIGMYG 295