Pairwise Alignments

Query, 319 a.a., putative translation-related protein from Pseudomonas putida KT2440

Subject, 324 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 95/324 (29%), Positives = 150/324 (46%), Gaps = 36/324 (11%)

Query: 5   APRIFA-TALIAL-LAAAGGLGYWKSLHDQLPEGLSMGNGRLEATEVQIASKIPGRLAEV 62
           A RI A TAL+AL L  A GL   K  +   P   S+  G++EA E  ++SK+PGR+ +V
Sbjct: 3   ANRILALTALVALGLILAYGL---KLAYSPQP---SLLQGQIEAREYNVSSKVPGRVEQV 56

Query: 63  LVDEGDNVIRGQLLARIDTRTMEAQRSQAE-----AEVLRARENYAAAQASVQLRQSELL 117
           LV  GD+V  G LL  I +  ++A+  QAE     A+ L+   N  A    V+  + + L
Sbjct: 57  LVRRGDSVSEGDLLFAIHSPELDAKLMQAEGGRDAAKALQQEANNGARTQEVRAAKEQWL 116

Query: 118 -------LASQELKRVREIFQRKFASQQLLDQQQARFDTANAAVVAARAQL--------- 161
                  LA     RV  +F    A++Q  D+   ++  A     AA A           
Sbjct: 117 KAQAAATLAKTTYTRVENLFNEGVAARQKRDEAFTQWQAAKYTEQAALAMYQMAEEGARV 176

Query: 162 ---AAIKAAIGAAEAQVAQLTSEIDDSSLRAPINGIIQLRLAEPGEVLGAGGRVLMLIDP 218
              AA       AE  V ++++ + DS +RAP +G I   L + GE+  +G  V+ LID 
Sbjct: 177 ETKAAAAGNARMAEGAVKEVSAIMADSQMRAPKSGEISEVLLQAGELAPSGFPVVSLIDM 236

Query: 219 SDQYMNLYLPASTSGRLTVGDQARIVLDALPERALPAKVAFVAAKAQF-TPKQVETRDER 277
            D +    +      R   GD+  + + AL ++ +   V+ ++    F T +  E+  + 
Sbjct: 237 QDAWAVFQVREDQLKRFKKGDKLPLTIPAL-DKTVEFTVSHISVMGDFATWRSTESGHDF 295

Query: 278 QKLVFRVKLRLSDPGAVPQAKPGM 301
               F V+LR + P  +P  + GM
Sbjct: 296 DMRTFEVELRPTAP--IPDLRVGM 317