Pairwise Alignments

Query, 540 a.a., putative Iron ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 543 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  385 bits (988), Expect = e-111
 Identities = 213/532 (40%), Positives = 326/532 (61%), Gaps = 9/532 (1%)

Query: 7   RRWYLPVSLIAALVLLPLSVLLLSWQSIDLQIWSHLLDTQMGRLLGNTLTLVVGVGIGVT 66
           + W     L A    LPL  + +     D  ++ HL+ T +   + NTL L++ V +G  
Sbjct: 7   KSWSTLSYLTAICFALPLGAICIQAMVPDEAVFGHLMQTVLPTYIFNTLALMLFVSLGAL 66

Query: 67  VLGVSLAWLTSLCDFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQSALREVFGP 126
           ++ V  AW  + CDFPGR    WAL+LP A+PAYV+A+V+  LLD+AGP+Q+ LR+V G 
Sbjct: 67  LIAVPAAWCVARCDFPGRNGFQWALLLPLAMPAYVVAYVYTDLLDYAGPIQTWLRQVNGW 126

Query: 127 MR-----LPRVRSTGGVITVLVLVFYPYVYLLARTAFLAQGKGLMEAARVLGLSPLQAFW 181
           +       P VR+ GG   +L LV +PY+YLLARTAF+ Q   L+ A+RV+G  P ++FW
Sbjct: 127 LSPTDYYFPDVRTLGGASVMLALVLFPYIYLLARTAFMEQSPSLLHASRVMGAGPWRSFW 186

Query: 182 RVALPMARPAIGAGIALALMETLADFGAVAVFNFDTFTTAIYKTWYGFFSLSSAAQLASL 241
           R+ LPMARPA+  G AL  MET ADF  V+ F   T TTA+Y TW G+ SL++AA+L+++
Sbjct: 187 RLNLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGSLAAAAKLSAI 246

Query: 242 LLLAVMLVLYGERRARGASRSGNERP--RAQALYHLRGLKALLASGWCLLVFACAFVIPL 299
           +LL V  ++  ER AR   +   ++    +   Y L G+KA LA+G+C ++   AF +P+
Sbjct: 247 ILLVVFCLIGAERFARRKQQLFQKQTPITSHERYALSGVKAWLAAGYCAVLLLLAFGLPV 306

Query: 300 LQLLAWFWQRGRHDLDERYIGLVLHTLYLGSMAALVTVCVALLLAFARRQAPTGGIRAGV 359
             LL + W       ++ +    L++L +  + +LVTV  ALLL F RR +P        
Sbjct: 307 WVLLGYAWDYFDVSWNQAFWEYSLNSLIIALVVSLVTVVFALLLMFVRRCSPRKIDILPS 366

Query: 360 GLANLGYALPGSVLAVSIMLAFSYLDNHLVIPLSSWLGGAGKPLLL-GSLSALLLAYLVR 418
            LA+ GYALPG+VLA+ +++  S LD   V  L ++   +G  L+  G+L  L+ A+ +R
Sbjct: 367 RLASTGYALPGTVLAIGVLVPLSLLD-FAVNDLYAYFDQSGPGLIFSGTLFVLIFAFAIR 425

Query: 419 FIAVAYGPLESSLERIRPSLPEASRSLGVGGARLFFKVYLPLLVPGALGAALLVFVDVLK 478
           F A+A G +E+S ++I PSL  AS ++G+  + +  +++LPLL  G   A LLVF++ +K
Sbjct: 426 FAAIAIGSIENSYKQISPSLDMASVTMGMRPSAILSRIHLPLLRSGIFAAILLVFIECMK 485

Query: 479 EMPATLLMRPFGWDTLAVRVFEMTSEGEWARASLPALTLVLVGLLPVIGLIR 530
           E+PA LL+RP G++ LA  V++  S+ +  + +L A+ +VLVGL+P+I L R
Sbjct: 486 ELPAALLLRPVGFENLATYVYQFVSDEQLEQGALGAIVIVLVGLIPLIYLNR 537