Pairwise Alignments

Query, 957 a.a., glycine dehydrogenase from Pseudomonas putida KT2440

Subject, 526 a.a., glycine cleavage system protein P, C-terminal domain from Caulobacter crescentus NA1000

 Score =  270 bits (690), Expect = 2e-76
 Identities = 167/441 (37%), Positives = 236/441 (53%), Gaps = 30/441 (6%)

Query: 483 SETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPGFAQLHPFAPAAQAA 542
           SE E +R+  +L  K+ A++ ++ PLGSCTMK N          PGF+ +HP  P +   
Sbjct: 77  SEPETVRHYVRLSQKNHAIDLALYPLGSCTMKHNPRLNEKMARLPGFSDIHPLQPQSTVQ 136

Query: 543 GYKAMIDELESWLCAITGFDAICMQPNSGAQGEYAGLMAITRYHCSRHQPMRTLCLIPSS 602
           G   ++D L  WL  +TG  A+ + P +GA GE  GL+AI   H +     R   L P+S
Sbjct: 137 GALELMDRLAHWLKTLTGMPAVALTPKAGAHGELCGLLAIRAAHEAAGNGHRKTVLAPTS 196

Query: 603 AHGTNPASAQMAGMEVVIVDCDNDGNVDLADLKAKAHAAGERLSCLMITYPSTHGVYEEG 662
           AHGTNPA+A   G  VV +    DG VDLADL++K    G+ ++ +M+T P+T G++E  
Sbjct: 197 AHGTNPATAAFVGYTVVEIAQTEDGRVDLADLESK---LGDHVAAIMVTNPNTCGLFERD 253

Query: 663 IREICDVVHQYGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGP 722
           + EI  + H  G   Y DGAN NA VG  RP D+G D  H+NLHKTF  PHGGGGPG GP
Sbjct: 254 VVEIARLTHAAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFSTPHGGGGPGAGP 313

Query: 723 IGIRAHLKPFVAS---------HPVVPVPGLDPNNSAVS--AAPWGSASILPISWMYIAM 771
           + +   L PF  +           +    G D   +A    +A  G   +   ++ Y+  
Sbjct: 314 VVLSEALAPFAPTPWLTHGDNGFELAEHAGDDDAKTAFGRMSAFHGQMGMYVRAYAYMLS 373

Query: 772 MGPQ-LADASEVAILSANYLASQL----GAAFPVLYRGRNQRVAHECILDLRPLKALTGI 826
            G   L   +E A+L+ANY+ +QL      AFP           HE + D   L+  TG+
Sbjct: 374 HGADGLRQVAEDAVLNANYIKAQLKDVMSPAFP------EGPCMHEALFDDSWLEG-TGV 426

Query: 827 SEEDVAKRLMDYGFHAPTMSFP--VPGTLMVEPTESESKAELDRFVEAM--LAIRAEIDE 882
           +  D AK ++D GFH  TM FP  V G +++EPTE+ESK ELDRF+ A+  LA  A+  +
Sbjct: 427 TTLDFAKAMIDEGFHPMTMYFPLVVHGAMLIEPTETESKHELDRFIAALRALAGAAKAGD 486

Query: 883 VQQGNWPAENNPLKHAPHTLA 903
            ++      + PL+    T A
Sbjct: 487 TERFKGAPFHAPLRRLDETQA 507



 Score = 36.2 bits (82), Expect = 6e-06
 Identities = 62/265 (23%), Positives = 101/265 (38%), Gaps = 26/265 (9%)

Query: 116 PYQPE-IAQGRLEALLNFQQMVIDLTGLPLANASLLDEATAAAEAMAL-AKRVARNKSN- 172
           P QP+   QG LE +      +  LTG+P    +L  +A A  E   L A R A   +  
Sbjct: 128 PLQPQSTVQGALELMDRLAHWLKTLTGMPAV--ALTPKAGAHGELCGLLAIRAAHEAAGN 185

Query: 173 ----AFFADEHCH---PQTLS-----VLKTRAEGFGFELIVDSVDNLAKHSVFGALLQYP 220
                  A    H   P T +     V++      G   + D    L  H V   ++  P
Sbjct: 186 GHRKTVLAPTSAHGTNPATAAFVGYTVVEIAQTEDGRVDLADLESKLGDH-VAAIMVTNP 244

Query: 221 DTHGEV-RDLRPLIDQLHSQQA-LACVAADLLSLVVLAPPGELGADVV-LGSTQRFGVPM 277
           +T G   RD+  +    H+  A   C  A+  ++V    PG+LG D + +   + F  P 
Sbjct: 245 NTCGLFERDVVEIARLTHAAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFSTPH 304

Query: 278 GYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTA 337
           G GGP A      +      P   +       G+    +A    +   +      +    
Sbjct: 305 GGGGPGAGPVVLSEALAPFAPTPWL-----THGDNGFELAEHAGDDDAKTAFGRMSAFHG 359

Query: 338 QVLLANIAGFYAVYHGPEGLQRIAQ 362
           Q+ +   A  Y + HG +GL+++A+
Sbjct: 360 QMGMYVRAYAYMLSHGADGLRQVAE 384