Pairwise Alignments

Query, 380 a.a., acetylornithine deacetylase from Pseudomonas putida KT2440

Subject, 384 a.a., succinyl-diaminopimelate desuccinylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 92/374 (24%), Positives = 145/374 (38%), Gaps = 44/374 (11%)

Query: 12  ALIAAPSVSCTQPALDQSNRQVIDLLAGWLGDLGFKCDIQQVSPGKFNLLASRGTGPGGL 71
           ALIA PSV+     LD+  +    L+A  L  +GF  +   V     N+ A RG      
Sbjct: 19  ALIARPSVT----PLDEGCQT---LMAERLAAIGFNIEAM-VFEDTTNMWARRGNTGPVF 70

Query: 72  VLAGHSDTVPY-DEQLWASDPLKLIETDGRWVGLGSCDMKGFFALVIEAVIPLLEHDFKE 130
             AGH+D VP  D   W + P +    DG   G G+ DMKG  A ++ A    +      
Sbjct: 71  CFAGHTDVVPTGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMVVATERFVAKHPNH 130

Query: 131 P--LLILATCDEESSMSGARA----LAEAGQPLGRAAILGEPTGLRPI-----RMHKGIL 179
           P  +  L T DEE              EA       A++GEP+    +        +G L
Sbjct: 131 PGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTLKLGDVVKNGRRGSL 190

Query: 180 MDRIDILGRSGHSSDPSLGRSAMEAMHAVMGELMGLRQQWQQTYSNPQFTVPTPTMNFGC 239
              + + G  GH + P L  + +      + EL       Q  + N     P  +M    
Sbjct: 191 TANLTVKGVQGHVAYPHLADNPIHKAAPFLAELS------QTHWDNGNAFFPPTSMQIAN 244

Query: 240 IHGGDN-PNRICGQCALEFDLRPLPGMDVDQLRAAIREKLVLVAERHEVRIDYAPLFPEV 298
           I+GG    N I G   + F+ R       +     + E++  +   HE+  D    F  +
Sbjct: 245 INGGTGASNVIPGALEVMFNFR----YSTEVTAEILIERVETLLTAHELDYDIRWTFNGL 300

Query: 299 P------PFEQAADVELVQVAERLTGHRAEAVAFG--TEAPYLQQLGCQTIVLGPGDIAC 350
           P      P   A    + QV    TG+  +    G  ++  ++   G + + LGP + A 
Sbjct: 301 PFLTGEGPLLDATRHAIRQV----TGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVN-AT 355

Query: 351 AHQPGEYLEMSRIE 364
            H+  E +++  +E
Sbjct: 356 IHKVNECVKVDDLE 369