Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 375 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  567 bits (1461), Expect = e-166
 Identities = 280/366 (76%), Positives = 319/366 (87%), Gaps = 2/366 (0%)

Query: 1   MNKMGKTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDS 60
           M   GKTLLA +LMG MA AVQA+DKVL+VYNWSDYIAPDT+AKFEK++GIKV YDVFDS
Sbjct: 11  MKIAGKTLLAMSLMGVMAGAVQADDKVLHVYNWSDYIAPDTVAKFEKESGIKVVYDVFDS 70

Query: 61  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDAS 120
           NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVY++LD+SKLPNWKNL+ DLLKAV   S
Sbjct: 71  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQKLDKSKLPNWKNLNTDLLKAVS-VS 129

Query: 121 DKDNKHAFPYMWGSIGIGYNPEKVKAALGVDK-IDSWDVVFKPENIAKLKSCGVSFLDAP 179
           D  N+HAFPYMWGSIGIG+NPEKVKAALG D   +SWD++FKPEN AKLK+CG+SFLD+P
Sbjct: 130 DPGNEHAFPYMWGSIGIGFNPEKVKAALGADAPTNSWDLLFKPENAAKLKACGISFLDSP 189

Query: 180 TEMLPAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGY 239
           TEM+P ALHYLG PTDS  K+ L  AE LFLKIRPSI YFHSSKYI D+ANGNICVAVGY
Sbjct: 190 TEMIPVALHYLGYPTDSQDKKQLAEAEALFLKIRPSIGYFHSSKYISDLANGNICVAVGY 249

Query: 240 SGDLEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEI 299
           SGD+ Q+K+RA EAG KVKV Y IPKEGAG+F+DMVAIPKDAE+ + AY+FM FL +PEI
Sbjct: 250 SGDIYQAKSRAAEAGGKVKVSYNIPKEGAGSFFDMVAIPKDAENVEGAYKFMTFLQKPEI 309

Query: 300 MAEITNAVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWT 359
           MAEIT+ V FPNGNAA+TP V K+ITSDP IYPPA+V+ +LYAIA   A+ QR++TRSWT
Sbjct: 310 MAEITDTVSFPNGNAASTPLVSKEITSDPGIYPPADVQAKLYAIADLPAATQRILTRSWT 369

Query: 360 KIKSGK 365
           KIKSGK
Sbjct: 370 KIKSGK 375