Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 362 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N1B4

 Score =  392 bits (1006), Expect = e-113
 Identities = 186/360 (51%), Positives = 260/360 (72%), Gaps = 2/360 (0%)

Query: 6   KTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDSNETLE 65
           K+++ A+L    +    A+  V +VYNW+DYI   T+A F+ +TG KV YDVFDSNETLE
Sbjct: 5   KSVVPASLALLFSVTAHAQSSV-SVYNWTDYIGETTLADFQAKTGTKVIYDVFDSNETLE 63

Query: 66  AKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKDNK 125
            KLLAG++GYD+VVPSN+FLA+Q+KAG + +LDRS+LPNWKNLDP LL A+ + SD  N+
Sbjct: 64  GKLLAGRTGYDVVVPSNHFLARQVKAGAFLKLDRSQLPNWKNLDPKLL-ALLEKSDPGNE 122

Query: 126 HAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPA 185
           H+ PY+WG+ GIGYN +KVK  LG+D+IDSW V F+PEN+ KL  CGVS +D+  E+ PA
Sbjct: 123 HSVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVFFEPENLKKLSQCGVSMMDSADEVFPA 182

Query: 186 ALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQ 245
            L+Y+G    S   ED K AE   L IRP ITYFHSSKY+ D+ANG+ICVA GYSGD+ Q
Sbjct: 183 VLNYMGMDPRSENPEDFKKAEAKLLTIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQ 242

Query: 246 SKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIMAEITN 305
           +  RA EA + V + Y IPKEG+  ++D++AIP DA +   A+ F+N L+ P+++A+++ 
Sbjct: 243 AANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPADASNPKEAHSFVNNLLDPQVIAKVSA 302

Query: 306 AVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTKIKSGK 365
           +V + N N AA  ++D ++ ++P +YPP EV  +LY    P   + R++TRSW+K+KS +
Sbjct: 303 SVGYANPNPAAKQYMDPELVNNPEVYPPQEVLDKLYISTTPPQPIMRLMTRSWSKVKSNQ 362