Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 366 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N1B4

 Score =  389 bits (999), Expect = e-113
 Identities = 193/366 (52%), Positives = 261/366 (71%), Gaps = 3/366 (0%)

Query: 1   MNKMGKTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQ-TGIKVKYDVFD 59
           MN++ + ++        + AV AE++ L VYNW DYI P  +  F+ Q T  K+ YD+FD
Sbjct: 1   MNRLKRLIVPVLYATVFSGAVHAEERTLRVYNWFDYITPKALEDFKAQNTQTKLVYDIFD 60

Query: 60  SNETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDA 119
           +NE LEAKLL G SGYD+VVPSN FLAKQI+AGV++ LDRSKLPNW +LDP L+K + +A
Sbjct: 61  TNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWNHLDPKLMKLI-EA 119

Query: 120 SDKDNKHAFPYMWGSIGIGYNPEKVKAALGVDK-IDSWDVVFKPENIAKLKSCGVSFLDA 178
           +D  NK A PYM+G+I IG+NP+K+KAALG +  +DSWD++FK ENI+KLK CGV+ LD+
Sbjct: 120 NDPGNKFAVPYMYGTILIGFNPDKIKAALGDNAPVDSWDLIFKEENISKLKQCGVALLDS 179

Query: 179 PTEMLPAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVG 238
           P+E+LP AL +LG   +S K  D   AE L +KIRP ITYFHSSKY+ D+ANG+ICVAVG
Sbjct: 180 PSEILPLALQHLGLDPNSKKPADYAKAEALLMKIRPYITYFHSSKYMADIANGDICVAVG 239

Query: 239 YSGDLEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPE 298
           YSG   Q+  RA EA + V VD  +PKEGA  ++DM+AIPK A++ + AY F+N+L+QP+
Sbjct: 240 YSGSFSQAANRAKEAKNGVIVDMRLPKEGAPIWFDMLAIPKGAKNPEDAYTFINYLLQPQ 299

Query: 299 IMAEITNAVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSW 358
           ++A +++ V +PN N  AT  VD  I ++P++YP       LY +       +R  TR+W
Sbjct: 300 VIAPVSDFVGYPNPNKDATEMVDPAIRNNPNLYPTEAAMSTLYTLQPLPRDAERARTRAW 359

Query: 359 TKIKSG 364
           TKIKSG
Sbjct: 360 TKIKSG 365