Pairwise Alignments

Query, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

Subject, 364 a.a., putrescine-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score =  367 bits (941), Expect = e-106
 Identities = 180/365 (49%), Positives = 256/365 (70%), Gaps = 1/365 (0%)

Query: 1   MNKMGKTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDS 60
           M+K+    L  A++        A+++V+NVYNWSDYI    + +F K+TGIKV YDVFDS
Sbjct: 1   MSKLIVATLTTAVLAGSTILAFAQERVVNVYNWSDYIDDSILEEFTKETGIKVVYDVFDS 60

Query: 61  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDAS 120
           NE LE KLLAG SGYD+VVP+  FL +QI AGV+++LD+SKLPN  N+   +++      
Sbjct: 61  NEILETKLLAGGSGYDVVVPTAYFLQRQIAAGVFQKLDKSKLPNISNMWDMVMERTAQY- 119

Query: 121 DKDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPT 180
           D  N++A  YMWG+ GIGYN EK+K  LG D+  +WDV+F PE  AK K CG+  LD+PT
Sbjct: 120 DPGNEYAVDYMWGTTGIGYNVEKMKEILGTDEKPNWDVIFDPEIAAKFKDCGIHLLDSPT 179

Query: 181 EMLPAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYS 240
           +++P+AL YLG   DS  + DL+ A DL +K+RP+I  FHSS+YI  +ANG+IC+AVG+S
Sbjct: 180 DIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKFHSSEYINALANGDICLAVGFS 239

Query: 241 GDLEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIM 300
           GD+ Q++ RA EA   V VDY IP++GA  ++DM+AIP DA H   A+EF+N++M+PE++
Sbjct: 240 GDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPADAPHVAEAHEFINYMMKPEVI 299

Query: 301 AEITNAVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTK 360
           A+ +N V + NGN A+  F+DK++  D +IYP   V ++L+     +A  QRV+TR WT+
Sbjct: 300 AKASNYVFYANGNKASQQFLDKEVLEDTAIYPSDAVMQKLFTTTPFEAKEQRVLTRLWTR 359

Query: 361 IKSGK 365
           I +G+
Sbjct: 360 IVTGQ 364