Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 288 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  176 bits (446), Expect = 6e-49
 Identities = 99/271 (36%), Positives = 162/271 (59%), Gaps = 19/271 (7%)

Query: 27  IWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGLLTEDELYLS 86
           +WL +F +LPF  +L  +F E       Y   +T+ +       NL             +
Sbjct: 22  VWLTVFLVLPFIAMLVFAFGER-APEGGYQPAFTFAQ-----FANLPTRA---------A 66

Query: 87  AYLGSLKMAFFSTLLCLLIGFPMAYAIA-NAKKETQTVLLLLIMMPTWTAILIRVYAWMG 145
           A+  +L +A    LLCL++ +P+AY +A  A    + +L+ L+++P WT++L+R YAWM 
Sbjct: 67  AFWNTLMLAPAGALLCLVVAYPVAYYLAVKANPRYRLILVSLVVVPFWTSLLVRTYAWMY 126

Query: 146 ILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLE 205
           IL + G+ N  L   G+ D  +++LNT  AV +G+VY YLP MI+P++ +L K D  LLE
Sbjct: 127 ILGSRGIPN-LLSMIGIED--VRMLNTPGAVLLGIVYGYLPLMIMPIYVSLEKLDRRLLE 183

Query: 206 AASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQ 265
           A++DLG    ++F  +T+PLS  G++ G  LV I ++GE++IP+LLGG +   IG  L  
Sbjct: 184 ASADLGGKPVSTFLGVTLPLSLPGVMTGVALVTILLLGEYLIPQLLGGGKVFFIGNALVD 243

Query: 266 EFFNNRDWPVASALAVVMLAILIVPILLFNR 296
            F  +R+WP  SA+AV ++A+++V +++  R
Sbjct: 244 LFLQSRNWPFGSAIAVTLVAVVVVVLMVAMR 274