Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 286 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  132 bits (332), Expect = 9e-36
 Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 13/265 (4%)

Query: 29  LFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYG-LLTEDELYLSA 87
           L LF   P   V + SF E             Y+ +     + L NY   LTE    ++ 
Sbjct: 16  LLLFVAFPMVWVFRTSFNELAEG--------AYIVE----AMTLENYTRFLTEPWYLVNT 63

Query: 88  YLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGIL 147
              S+++A  +T + ++  +P+A  IA      + VL+ L M P    ++  VY W+ I 
Sbjct: 64  LWFSVRIALLATAISVICAYPVALYIAKTSGLQRNVLMALTMAPLLIGLVTLVYGWIVIF 123

Query: 148 SNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAA 207
              GL+N  ++   + DQP++ +     V I +VY   P+++L L  ++ + +P L+EAA
Sbjct: 124 RGGGLMNSLMIALRVYDQPVRYMWDIKGVVILLVYIGTPYIVLSLLDSIERINPFLVEAA 183

Query: 208 SDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEF 267
            ++G++ + +FWKI  PLS  G+ AG ++VF      F +P ++G   T MIG V+++E 
Sbjct: 184 RNVGANRWTAFWKIVFPLSTPGLYAGLVIVFSLNFAAFAVPLMIGDSNTQMIGLVIYREA 243

Query: 268 FNNRDWPVASALAVVMLAILIVPIL 292
             N D P ASAL+V+M+++  + IL
Sbjct: 244 LLNNDLPFASALSVIMVSVNALLIL 268