Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 291 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  160 bits (404), Expect = 4e-44
 Identities = 88/260 (33%), Positives = 144/260 (55%), Gaps = 20/260 (7%)

Query: 29  LFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGLLTEDELYLSAY 88
           L LFF+LP  ++L  S  E                     V  L NY  L     YL  +
Sbjct: 34  LILFFVLPVAMLLTRSVTEP--------------------VPGLGNYAELLGSSTYLRIF 73

Query: 89  LGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGILS 148
             +  ++   TL+ LLIGFP+A+A+A       +++  ++++  WT +L R YAWM +L 
Sbjct: 74  ANTFIVSSLVTLVSLLIGFPVAWALAIMPSRAASIVFAILLLSMWTNLLARTYAWMVLLQ 133

Query: 149 NNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAAS 208
             G++N  LL  GLID PL ++N    V IG+ Y  LPF+ILPL+  + K DP++L+AA+
Sbjct: 134 RTGVINKMLLGMGLIDTPLPLVNNLTGVTIGMTYIMLPFIILPLYGVIRKIDPAILQAAA 193

Query: 209 DLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEFF 268
             G++ + S  ++ +PL+  G+ AG ++VF+  +G FV P LLGG   +M+ +++ Q   
Sbjct: 194 LCGANRWQSLVRVLLPLAMPGMAAGALMVFVMSLGYFVTPALLGGTSNMMLAELIAQFVQ 253

Query: 269 NNRDWPVASALAVVMLAILI 288
           +  +W +  A A+V+L + +
Sbjct: 254 SLVNWGMGGAAALVLLVVTL 273