Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 283 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  169 bits (428), Expect = 7e-47
 Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 21/291 (7%)

Query: 6   LKRAFQRLVPEGRHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDK 65
           +K     ++ EG   ++    I+L LFF++P   V+ +S +                   
Sbjct: 1   MKHRTSPVLVEGPMPLMAPAVIFLALFFLVPLGYVIWMSLS------------------- 41

Query: 66  IQLVLNLANYGLLTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLL 125
            Q V+ L N+G L    L+ S    + K A   TLL LL  +P+AYA AN  K   T LL
Sbjct: 42  -QPVIGLQNFGRLLNSSLFASVLYNTFKTALLVTLLSLLFAYPLAYAAANGSKRFATFLL 100

Query: 126 LLIMMPTWTAILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYL 185
            ++ +  WT+ L+R YAWM IL N G +   L W G    P +IL T  +  + + ++ +
Sbjct: 101 TVVALSFWTSYLVRTYAWMVILGNQGPVTALLSWFGWDPTP-KILFTTFSATLAMTHALI 159

Query: 186 PFMILPLFANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEF 245
           PFM + LFA + + DP  + AA +LG+  F +F  + +PLS  GI+ GC LVFI  +G +
Sbjct: 160 PFMTMSLFAVMKRIDPLYVRAAENLGAHPFRAFVSVYLPLSAPGIVNGCTLVFITCLGFY 219

Query: 246 VIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNR 296
           V+P LLG P   MI  ++  +     D+ + SA+++V+LA+ +    L+NR
Sbjct: 220 VMPVLLGSPRDQMIAGIIGDQIEQTLDFGLGSAISIVLLALTLAVYGLYNR 270