Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 327 a.a., spermidine/putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  169 bits (429), Expect = 6e-47
 Identities = 98/279 (35%), Positives = 159/279 (56%), Gaps = 13/279 (4%)

Query: 20  LVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGLLT 79
           L+ GVP  W+    + P F + +ISF       P     YT           LANY L  
Sbjct: 50  LLAGVPLFWIAALHIGPIFQMGRISFMADYPQAPDGGSPYT-----------LANYELFF 98

Query: 80  EDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIAN-AKKETQTVLLLLIMMPTWTAILI 138
            D+LY   ++ SL  A   T+  L+I +P+AY +A   + + +   LLL+++P W   LI
Sbjct: 99  SDQLYFMPFIRSLIFAAVVTISTLVIVYPVAYYVAKIVQPKNRMRALLLLLIPFWAGELI 158

Query: 139 RVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVK 198
           R ++ + +L+N G +N  L   G ID+P+ +L T+ ++  GV+Y    +M+LPL++ + K
Sbjct: 159 RTFSVIMLLANRGAVNVALRELGFIDRPIPMLYTSFSLSFGVIYLLALYMLLPLYSAIEK 218

Query: 199 HDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLM 258
               L+ AA+DLG+  F  F ++ +PLSK+GI++GC LV++  VG F  P LLGGP T++
Sbjct: 219 IPTPLIHAAADLGAGPFQRFRRVILPLSKDGIVSGCSLVYLTSVGVFAAPLLLGGPNTVI 278

Query: 259 IGKVLWQEFFNNRD-WPVASALAVVMLAILIVPILLFNR 296
             +V+   F ++ D WP  +A A+++LA+ +  + LF R
Sbjct: 279 FPEVIATLFHSSNDKWPEGAAFAMLLLAVSLSTVGLFMR 317