Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 423 a.a., spermidine/putrescine transport system permease protein PotB from Phaeobacter inhibens DSM 17395

 Score =  152 bits (383), Expect = 2e-41
 Identities = 81/258 (31%), Positives = 148/258 (57%), Gaps = 7/258 (2%)

Query: 38  FIVLKISFAEADV--AIPPYTEIYT--YVEDKIQLVLNLANYGLLTEDE-LYLSAYLGSL 92
           FI +   +A+ +V   I  Y+  YT  Y  +            L  E+E +Y + +L +L
Sbjct: 148 FIKIDEDWADPEVWRTIQTYSGAYTNGYFLNAADFQKGAEGAELRPENERIYGTLFLRTL 207

Query: 93  KMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGILSNNGL 152
            M+   T+ C+++G+P+A+ +AN    T  +L++L+++P WT++L+R  AW  +L   G+
Sbjct: 208 IMSLAITVSCIVLGYPVAWILANLPSRTANLLMILVLLPFWTSLLVRTSAWKVMLQQQGV 267

Query: 153 LNGFLLWTGLI--DQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAASDL 210
           +N  L+W GL+  D  L ++N      + + +  LPFMILP+++ +   +PS L AA  L
Sbjct: 268 INDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQTINPSYLRAAKSL 327

Query: 211 GSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEFFNN 270
           G++ + +FW++  P S  GI AG +LVFI  +G ++ PEL+GG + + I   +      +
Sbjct: 328 GATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFISNRIAFHISQS 387

Query: 271 RDWPVASALAVVMLAILI 288
            +W +A+AL  ++L +++
Sbjct: 388 LNWGLAAALGSILLVVVL 405