Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 293 a.a., spermidine/putrescine ABC transporter, permease protein from Marinobacter adhaerens HP15

 Score =  402 bits (1032), Expect = e-117
 Identities = 187/286 (65%), Positives = 235/286 (82%)

Query: 18  RHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGL 77
           R +V G+PF+WL LFF+LPF +VLKIS   A +AIPPY  ++ +V++ + +V+N+ NY  
Sbjct: 5   RRVVFGIPFLWLLLFFLLPFALVLKISLTSAVMAIPPYEPVFRWVDNTLSVVVNIGNYLF 64

Query: 78  LTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAIL 137
           L  D LY +AY GS+K AF +T++CLLIG+PMAYA+A   K  Q VLLL++M+P+WT+ L
Sbjct: 65  LLSDSLYFAAYWGSVKTAFLATVMCLLIGYPMAYAMARTPKHWQLVLLLMVMLPSWTSFL 124

Query: 138 IRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLV 197
           IRVYAWMGIL N GLLN FL+W G IDQPL++LNTN AV +G+VY+YLPFM+LP++ NLV
Sbjct: 125 IRVYAWMGILGNQGLLNSFLMWLGFIDQPLKMLNTNFAVVLGIVYAYLPFMVLPIYTNLV 184

Query: 198 KHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETL 257
           K D  LLEAASDLG  +  +FW IT+PLSK GI+AG MLVFIP VGEFVIPELLGGP+TL
Sbjct: 185 KLDVRLLEAASDLGCRSLTTFWAITLPLSKAGILAGSMLVFIPAVGEFVIPELLGGPDTL 244

Query: 258 MIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNRSQAKEME 303
           MIGKVLW+EFFNNRDWPVASALA+VML +L+VPI+LF+R QA+EME
Sbjct: 245 MIGKVLWEEFFNNRDWPVASALAIVMLLLLLVPIVLFHRFQAREME 290