Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 281 a.a., spermidine/putrescine ABC transporter, permease protein PotB from Marinobacter adhaerens HP15

 Score =  193 bits (490), Expect = 4e-54
 Identities = 110/277 (39%), Positives = 161/277 (58%), Gaps = 15/277 (5%)

Query: 28  WLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGLLTEDELYLSA 87
           WL    + P  +V+  S    D                + L LNL  Y  L  D LYL  
Sbjct: 16  WLLFLVLAPNLLVVGASVMTRDPV------------SFLSLPLNLDAYRQLF-DPLYLDV 62

Query: 88  YLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGIL 147
           +L SL MA  +TL+CLLIG+P A+A++   K+ Q VL+ L+++P WT  L+R YA   IL
Sbjct: 63  FLHSLYMAAMTTLVCLLIGYPFAWALSKVGKQRQLVLIFLLIVPFWTNSLVRTYALKLIL 122

Query: 148 SNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAA 207
           + NGLLN  L+  GLID+PLQ+L T  AV IG+VY  LPFMILPL++        LL A+
Sbjct: 123 ATNGLLNSALMSIGLIDEPLQLLYTEGAVIIGLVYLLLPFMILPLYSVFEDLKQELLLAS 182

Query: 208 SDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEF 267
            DLG+   ++F  + VPL+  G++AG MLV +P +G F +P++LGG   L++G V+  +F
Sbjct: 183 HDLGAGRLSTFVHVIVPLTLPGVLAGVMLVLLPAMGLFFVPDILGGSRNLLVGNVIKNQF 242

Query: 268 FNNRDWPVASALAVVMLAILIVPILLFNRSQAKEMEG 304
            + R+WP  +A ++V+   + +  L+F    +K   G
Sbjct: 243 LDARNWPFGAAASIVL--TVTMAFLMFAHRLSKRRIG 277