Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 285 a.a., spermidine/putrescine ABC transporter permease PotB from Klebsiella michiganensis M5al

 Score =  214 bits (544), Expect = 2e-60
 Identities = 112/280 (40%), Positives = 171/280 (61%), Gaps = 13/280 (4%)

Query: 18  RHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGL 77
           +++VI     WL LF  LP  +++  SF   D              + ++LV  L NY  
Sbjct: 8   QNVVIATIVGWLVLFVFLPNLMIIATSFLTRDDT------------NFVKLVFTLDNYAR 55

Query: 78  LTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAIL 137
           L  D LY    L SL MA  +TL CL +G+P A+ +A   ++ + ++L L+++P WT  L
Sbjct: 56  LL-DPLYYDVLLHSLNMALLATLACLALGYPFAWFLARLPEKVRPLMLFLLIVPFWTNSL 114

Query: 138 IRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLV 197
           IR+Y     LS  G LN FLLW G+ID PL+I+ T  AV IG+VY  LPFM++PL++++ 
Sbjct: 115 IRIYGLKIFLSTKGYLNEFLLWLGVIDTPLRIMYTPSAVIIGLVYILLPFMVMPLYSSIE 174

Query: 198 KHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETL 257
           K D  LLEAA DLG+S   +F +I +PL+  GIIAGC+LV +P +G F + +L+GG + L
Sbjct: 175 KLDRPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNL 234

Query: 258 MIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNRS 297
           +IG V+  +F N RDWP  +A ++ +  ++ + +L++ R+
Sbjct: 235 LIGNVIKSQFLNIRDWPFGAATSITLTLVMGLMLLIYWRA 274