Pairwise Alignments

Query, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

Subject, 309 a.a., putrescine/spermidine ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  360 bits (925), Expect = e-104
 Identities = 170/308 (55%), Positives = 230/308 (74%), Gaps = 8/308 (2%)

Query: 6   LKRAFQRLVP--------EGRHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTE 57
           +KR+F  L           GR  V+  PFIWL LFF++PF +V+KISFA+  + IPPYTE
Sbjct: 1   MKRSFNSLATWPVRRFKLSGRTAVVAGPFIWLLLFFLVPFLLVVKISFADLQLGIPPYTE 60

Query: 58  IYTYVEDKIQLVLNLANYGLLTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAK 117
           +  + +  I + L+L++Y  L  D LY + Y+ S+ +A  STLLCLLIG+PMAY IA + 
Sbjct: 61  LTNFADGAIHITLDLSHYAFLLTDSLYFATYVNSVVVAAISTLLCLLIGYPMAYYIARSN 120

Query: 118 KETQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVY 177
             ++ +L++ +M+P WT+ LIRVYAW+GIL NNGLLN FL+  GLI  P+++ +TN AVY
Sbjct: 121 PGSRNLLMMAVMLPFWTSFLIRVYAWIGILKNNGLLNNFLMSIGLIHSPIELYHTNTAVY 180

Query: 178 IGVVYSYLPFMILPLFANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLV 237
           IG+VYSYLPF+++PL+A+LVK D +LLEAA DLG+  + +FW+IT+PLSKNGIIAGC+LV
Sbjct: 181 IGMVYSYLPFLVMPLYAHLVKMDMTLLEAAYDLGAKPWKAFWQITLPLSKNGIIAGCLLV 240

Query: 238 FIPVVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNRS 297
           FIP VGE+VIPELLGG  TLMIG+V+W EFF+N DWP+ASA+   M+ +L+VP+  F  +
Sbjct: 241 FIPAVGEYVIPELLGGANTLMIGRVMWNEFFDNADWPMASAVTCAMVLLLLVPMAFFQYA 300

Query: 298 QAKEMEGR 305
           QAK ME R
Sbjct: 301 QAKAMEER 308