Pairwise Alignments

Query, 297 a.a., spermidine/putrescine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 278 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  307 bits (786), Expect = 2e-88
 Identities = 159/277 (57%), Positives = 207/277 (74%), Gaps = 3/277 (1%)

Query: 1   MKRFSFSKLMLVLGLLFIYLPMLILVIYSFNASKLVTVWGGWSIKWYVGLLDNSQLMGSV 60
           M+R  F  L +  G  F+Y+P+L+L+IYSFN S+LVTVW G+S KWY  LL + Q++G+ 
Sbjct: 1   MRRNWFLLLTMGFGFAFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLRDEQMLGAA 60

Query: 61  MRSLEIACYTAVAAVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLF 120
             S  IA   A  A  LGTLAA  + R  RF+GRTLF G+++APLVMPEVITGL+ LLLF
Sbjct: 61  WMSFRIAVVNASLATILGTLAALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLF 120

Query: 121 VAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKVF 180
           VA+ Q++GWPQ RG+ TI IAH TF  AYVAVV+ +RL+ +D SIEEAAMDLGA+P KVF
Sbjct: 121 VALEQLLGWPQGRGMTTITIAHITFSTAYVAVVLQSRLQGMDRSIEEAAMDLGARPAKVF 180

Query: 181 FLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAV 240
            LITIP+IAP+L AG ++SF LSLDDLV+ASFVSGP S+TLPM VFS+VRLGV PEINA+
Sbjct: 181 LLITIPVIAPALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINAL 240

Query: 241 ASLILLSVSLVTFFV-WYFSRQAEERRRKAIQQAIEE 276
           A++++L+ ++      W  +RQ  ER  + + +  E+
Sbjct: 241 ATILVLTATVAILIAGWMMTRQ--ERASQKLTEKREQ 275