Pairwise Alignments

Query, 297 a.a., spermidine/putrescine ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  347 bits (891), Expect = e-100
 Identities = 170/267 (63%), Positives = 216/267 (80%)

Query: 1   MKRFSFSKLMLVLGLLFIYLPMLILVIYSFNASKLVTVWGGWSIKWYVGLLDNSQLMGSV 60
           +++ SFS LML  G+ F+Y PM ILV YSFN SKLVTVWGG+S KWY  L  + Q++ +V
Sbjct: 5   LRKLSFSTLMLWGGMFFLYAPMFILVFYSFNESKLVTVWGGFSAKWYGELFRDDQILDAV 64

Query: 61  MRSLEIACYTAVAAVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLF 120
             SL++A + +  AV LGT+AAFV+TR  R  G+     ++TAPLVMPEVITGLSLLLLF
Sbjct: 65  ATSLKVAFFASTMAVILGTMAAFVMTRFARSWGKMTLSNMITAPLVMPEVITGLSLLLLF 124

Query: 121 VAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKVF 180
           V MA ++GWP ERG++T+WIAH+TFCAAYVAVVVS+RLRELD+SIEEAA DLGA P K F
Sbjct: 125 VHMADLLGWPAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGATPLKTF 184

Query: 181 FLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAV 240
           F IT+PMI+P+L AG ++SF+LSLDDLV+ASF SGPG+TTLPM VFS+VR+GV P+INA+
Sbjct: 185 FHITVPMISPALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSPKINAL 244

Query: 241 ASLILLSVSLVTFFVWYFSRQAEERRR 267
           A+LI+L VSL+ F  WY +R+A++R R
Sbjct: 245 ATLIILIVSLIAFISWYLARRADKRSR 271