Pairwise Alignments

Query, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 314 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (354), Expect = 4e-38
 Identities = 109/302 (36%), Positives = 151/302 (50%), Gaps = 7/302 (2%)

Query: 53  VQARVQTDLSFRVGGKIISRSVDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARV 112
           V ARVQ+DL FRV GK++ R VD G  VK  Q L RLDP DL     + +  V AA+AR 
Sbjct: 1   VAARVQSDLGFRVSGKVLERLVDAGQAVKKGQPLMRLDPIDLGLQARAQQEAVTAARARA 60

Query: 113 TQTSAAFVRQQKLLPKGYTSQSEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSE 172
            QT+    R ++L+  G  S S YD  +AA  + ++ L AA+AQ   A     Y  L+++
Sbjct: 61  KQTADDEARYRELVAAGAISASGYDQIKAAADTAKAQLSAAEAQADVARNASGYAVLLAD 120

Query: 173 AAGVITERQAEVGQVVQATMPIFSLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPK 232
           A GV+ E  AE GQVV    P+  LA  G R+AV  + E+L  A  S A   +       
Sbjct: 121 ADGVVMETLAEPGQVVSPGQPVVRLARAGQREAVVQLPETLRPAVGSSAQATLYGSTSGA 180

Query: 233 VQAHGFVREITPTVSAQSGTVQVKVGLKDVPPGMQLGAPVT---ATTNAQGRPSIELPWS 289
           V A   +R ++ +    + T + +  L+       LG+ VT   A   AQG P +++P +
Sbjct: 181 VTAR--LRLLSDSADRVTRTFEARYVLEGALANAPLGSTVTLRIAEGVAQG-PVLQVPIA 237

Query: 290 ALTKALHEPAVWVV-GEGDKVELRKVEIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGM 348
           AL    +   VWV+ GE  KV  R V++         VA  L  GE +V  G  LL  G 
Sbjct: 238 ALYDPGNGTGVWVIDGEPAKVTWRPVQVLGLSDDAARVAGRLNVGERIVALGAHLLREGE 297

Query: 349 QV 350
            V
Sbjct: 298 PV 299