Pairwise Alignments

Query, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 380 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 39/366 (10%)

Query: 12  LGLLYMLTGCSKEEVP--ETLPRVGVQQVQPTDFAARVTLTGDVQARVQTDLSFRVGGKI 69
           L +   L GC +E  P  +  P+VG+  +Q   FA    L G  +A    ++  +V G I
Sbjct: 14  LAMAVFLAGCQEEAAPPAQQKPKVGIVTLQAEPFAVTTELPGRTRAYRIAEVRPQVNGII 73

Query: 70  ISRSVDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKG 129
             R    G  VKA Q L ++D    +  + SA+A V A+   +    A  V+ Q +    
Sbjct: 74  QKRLFTEGSDVKAGQQLYQIDASVYEATLKSAQASV-ASSKSLADRYAELVKDQAV---- 128

Query: 130 YTSQSEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAG-----------VIT 178
             S+  YD A AA          A+A+L  A   + YT +++  +G           +++
Sbjct: 129 --SKQAYDEARAASLQ-------AEAELERARIDVRYTKVLAPISGRVGRSAVTEGALVS 179

Query: 179 ERQAEVGQVVQATMPIFSLAVDGDRDAVF---NVYESLLVAPPSDAGVVVSLLDDPKVQA 235
             QA+    +Q   PI+       RD +    ++ E  L     +A  V   L+D    A
Sbjct: 180 NGQAQELATIQQLDPIYVDVTQPARDLLALRRDLAEGRLQKSGDNAAKVTLKLEDGSDYA 239

Query: 236 HGFVREITP-TVSAQSGTVQVKVGL----KDVPPGMQLGAPVTATTNAQGRPSIELPWSA 290
           H    E +  TV A +G+V ++       KD+ PGM + A + A   ++   +I +P   
Sbjct: 240 HEGKLEFSEVTVDAGTGSVTLRAVFPNPDKDLLPGMFVHAQLVAGMKSE---AILVPQQG 296

Query: 291 LTKALH-EPAVWVVGEGDKVELRKVEIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQ 349
           +T+    +P   VV    KVE+R ++  R +  + +V  GL+ G+ V+  G Q + PG++
Sbjct: 297 VTRNTKGDPTAMVVNAESKVEVRPIKTERAVGNRWLVGEGLQPGDRVITEGLQFIQPGVE 356

Query: 350 VLKVDA 355
           V  V A
Sbjct: 357 VEAVPA 362