Pairwise Alignments

Query, 1017 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1040 a.a., multidrug transporter from Cupriavidus basilensis FW507-4G11

 Score =  733 bits (1892), Expect = 0.0
 Identities = 401/1015 (39%), Positives = 603/1015 (59%), Gaps = 6/1015 (0%)

Query: 2    KGSFNLSDWALKHQSFVWYLMFVSLLMGIFSYFNLGREEDPSFTIKTMVIQTRWPGATQD 61
            +G FNLS  A++ ++   +L+ +  + G+ S+F LGR EDP+FT+K M I T WPGAT  
Sbjct: 3    QGRFNLSALAVRERAITLFLIGLISVAGLVSFFKLGRAEDPAFTVKVMTIITAWPGATAQ 62

Query: 62   ETLYQVTDRIEKKLEELDSLDYTKSYTRPGESTVYVYLRDTTKAKDIPDIWYQVRKKIQD 121
            E   QV ++IEK+++EL   D T++YTRPG +   + L D+T   ++ + +YQ RKK+ D
Sbjct: 63   EMQDQVAEKIEKRMQELRWYDRTETYTRPGLAFTTLSLLDSTPPSEVQEEFYQARKKVSD 122

Query: 122  IRGEFPAGIQGPGFNDEFGDVFGSIYAFTADGLTLRQLRDYVEQARAEVRDVPNIGKIEL 181
                 P G+ GP  NDE+ DV  +++A  A G   R L    E  R  +  VP + K+ +
Sbjct: 123  EVANLPPGVIGPMVNDEYADVTFALFALKAQGEPQRVLVRDAETLRQRLLHVPGVKKVNI 182

Query: 182  VGTQDEVLYLNFSTRKLAALGIDQRQVMQALQAQNAVTPAGMIEAGPERISVRTSGQFAS 241
            +G Q E +Y+ FS  +LA LG+  + V  AL  QNA+T AG +E    ++ +R  G F  
Sbjct: 183  IGEQPERIYVEFSHDRLATLGVSPQDVFAALNGQNALTAAGSVETKGPQVFIRLDGAFDQ 242

Query: 242  EKDLQTVNLRINDRFFRLADIADIERGYVDPPSPMFRYNGQTAIGLAIGMKAGGNIQVFG 301
             + ++   +    R  +L+DIA ++RGY DP + M R  GQ A+ L I M+ G N    G
Sbjct: 243  LQKIRDTPVVSQGRTLKLSDIATVKRGYEDPATFMVRNGGQPALLLGIVMREGWNGLDLG 302

Query: 302  AALKKRMDQVVQDLPVGVGVHTVSDQAVVVKQAVGGFTSALFEAVVIVLAVSFVSLGVRA 361
             AL K +  +  D+P+G+ +  V+DQAV +  AV  F    F A+V+V+ VSFVS+G RA
Sbjct: 303  KALDKEVGAINADMPLGMSLTKVTDQAVNISAAVDEFMLKFFAALVVVMLVSFVSMGWRA 362

Query: 362  GLVVACSIPLVLAMVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEVMVTRLEMGE 421
            GLVVA ++PL LA+VFV M  +G    RI+LG+LI+ALGLLVDDA+I +E+MV ++E G 
Sbjct: 363  GLVVAAAVPLTLAVVFVVMVATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGY 422

Query: 422  SKEQAATFAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVALIVSWVVA 481
            S+  A+ +A++ TA PML+GTLVT  GF+P G   SSAGEYT  +F ++ +ALI SWVVA
Sbjct: 423  SRVAASAYAWSHTAAPMLSGTLVTAVGFMPNGFARSSAGEYTSNMFWIVGIALIASWVVA 482

Query: 482  VFFAPVLGVHILKGDKL--KAHEA--EPGRVGRAFEGGLLWCMRNRWLTIIGTVVLFALA 537
            V F P LGV +L   K     H+A  +  R  R F   L + +  +WL     V LF LA
Sbjct: 483  VVFTPYLGVKMLPDFKKVEGGHDAIYDTPRYNR-FRALLGYVIARKWLVAGSVVGLFVLA 541

Query: 538  IFCMRFVQNQFFPSSDRPEILVDLNLPQNASIEETRKVVDRFEARIKDDPDLVHWSTYIG 597
            I  M  V+ QFFP SDRPE+LV++ +P   SI +T     + EA +    +    + Y+G
Sbjct: 542  ILGMAVVKKQFFPISDRPEVLVEVQMPYGTSINQTSAATAKLEAWLAKQKEARIVTAYVG 601

Query: 598  QGAIRFYLPLDQQLQNPYYAQLVIVSKGFEERQAMMDRLQKILHEEFV-GVGTNVQSLEM 656
            QGA RFY  +  +L +P +A++V+ +   EER A+  RL++ + +         V  L  
Sbjct: 602  QGAPRFYFAMGPELPDPSFAKIVVRTDSQEERDALKQRLRQAVADGLAPEARVRVTQLVF 661

Query: 657  GPPVGRPIQYRVSGADIDQVRKHAIELATLLDQNEHIGEMIYDWNEPGKVLRVEIAQDKA 716
            GP    P+ YRV+G D   +R+ A ++  ++D +  +  +  DW      L   + QD+ 
Sbjct: 662  GPYSPFPVAYRVTGPDAQTLRRIAADVRQVMDASPMMRTVNTDWGMRVPTLHFTLEQDRL 721

Query: 717  RQLGLSSEDVANVMNSIVSGVQITQVNDNIYLVDVVARAEDSERGSPDTLQNLQILTPNG 776
            + +GL+S  VA  +  +++G+ +T V ++I  V V AR+    R  P  + +  +   NG
Sbjct: 722  QAVGLTSSAVAQQLQFLLNGIPVTAVREDIRTVQVTARSAGDIRLDPARIGDFTLAGANG 781

Query: 777  TSIPLLSFATVRYELEQPLVWRRDRKPTITIKASVNGEIQPTDLVAQLKPKIDEFASKLP 836
              IPL     +   +E+P++ RRDR PTIT++  +   +QP D+   +  ++     KLP
Sbjct: 782  QRIPLSQVGKIDVRMEEPIIRRRDRMPTITVRGDIADGLQPPDVSTAISKQLAPIIEKLP 841

Query: 837  VGFEVATGGTVEESAKAQGPIRKVIPLMLFLMATFLMIQLHSVQKLFLVVSVAPLGLIGV 896
             G+ +   G++EES KA   +  + P+ML +    L+ Q+ S+  + +V   +PLGLIGV
Sbjct: 842  SGYRIEQAGSIEESGKATKAMLPLFPIMLAVTLLILIFQVRSIAAMVMVFLTSPLGLIGV 901

Query: 897  VLALVPTGTPMGFVAILGILALAGIIIRNSVILVTQIDEFEAQGLSPWDAVVEATNHRRR 956
            V  L+  G P G  A++G++AL+GI++RN++IL+ QI   + +GL P+ AVVEAT  R R
Sbjct: 902  VPMLILFGQPFGINALVGLIALSGILMRNTLILIGQIQHNKEEGLDPFRAVVEATVQRAR 961

Query: 957  PILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIVATLLTLLFLPALYVAWYKIR 1011
            P++LTA AA L  IP+   VFWG +AY +IGG    T+LTL+FLPA+Y  W+KIR
Sbjct: 962  PVILTALAAILAFIPLTHSVFWGALAYTLIGGTFAGTILTLVFLPAMYSIWFKIR 1016