Pairwise Alignments

Query, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 260 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 22/262 (8%)

Query: 308 LTIVLLVCAALLVVIGMAVYSSLVTFWPYNLSLSLRHYMFEDTAGGGWLAYRNSVTMAIG 367
           LTI+ LV A L+ ++ +A  SS++  +P   S SLR +    TA     A  NS+ +  G
Sbjct: 13  LTILFLV-APLIAILPLAFTSSVILTYPIP-SWSLRWFEELFTADAWRRAIFNSLIIGTG 70

Query: 368 TALIGSIVIFTGAYLMEKTQGQRLLNHALRLLSFIPMAVPGLVLGLGYVFFFNLNGNPLH 427
           T L+ +I + T A L  + +       ++R L  +PM VP +VLG+G           + 
Sbjct: 71  TTLLATI-LGTAASLGLRNR-LIFFRGSMRTLFLLPMVVPAVVLGVG-----------MQ 117

Query: 428 VLYGGMGLL---VVCTIAHYLTTAQMTATTALRQLDG---EFEAAALSLKAPLYKHFLRV 481
           VL  G GL        IAH +        + +  LDG     E AA SL A     F RV
Sbjct: 118 VLLAGFGLTNSYAGVIIAHTVVAVPFVVVSVIGALDGIDERVELAAQSLGASPATVFHRV 177

Query: 482 TVPICLPALLDIIRYLFVSAMTTVSAAIFLYSPDTLLAAIAVLNMDDAGNVGGAAAMSTL 541
           T+P+ LP +L      F +++  V   +F+  P+    A  + +     N+  A A +  
Sbjct: 178 TLPLALPGVLSGAVLAFATSLDEVVLTLFVAGPNQRTLARQMFS-SIRENISPAIAAAAF 236

Query: 542 ILLTSAGASLLLAAASRGLLRR 563
           + + +     L+   SR +L +
Sbjct: 237 LFIAATIFFGLVVVLSRFMLAK 258



 Score = 63.5 bits (153), Expect = 9e-15
 Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 38  LLVLAVLMPLLAIFWRGFSGEAG-----QGGGLLAARELFTSASFHWLLGNSLSVAFTVA 92
           L +L ++ PL+AI    F+             L    ELFT+ ++   + NSL +     
Sbjct: 13  LTILFLVAPLIAILPLAFTSSVILTYPIPSWSLRWFEELFTADAWRRAIFNSLIIGTGTT 72

Query: 93  AIVVPLAYLFAFALQRTLIPAKGLWRGISLLPLLAPSMLPAIALVYLFGNQGLLRGLLSD 152
            +   L    +  L+  LI  +G  R + LLP++ P+++  +      G Q LL G    
Sbjct: 73  LLATILGTAASLGLRNRLIFFRGSMRTLFLLPMVVPAVVLGV------GMQVLLAGFGLT 126

Query: 153 NIYGFWGIVLGEAIYTFPHALMILLSALSLADARLFDAASSMGAGSWRAFTSITWPASRQ 212
           N Y   G+++   +   P  ++ ++ AL   D R+  AA S+GA     F  +T P +  
Sbjct: 127 NSYA--GVIIAHTVVAVPFVVVSVIGALDGIDERVELAAQSLGASPATVFHRVTLPLALP 184

Query: 213 AVFAAFCLVFTLTITDFGVPVVVGGDYQ-VLALEAYKAV 250
            V +   L F  ++ +  + + V G  Q  LA + + ++
Sbjct: 185 GVLSGAVLAFATSLDEVVLTLFVAGPNQRTLARQMFSSI 223