Pairwise Alignments

Query, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 601 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  145 bits (366), Expect = 5e-39
 Identities = 150/577 (25%), Positives = 251/577 (43%), Gaps = 51/577 (8%)

Query: 29  VGGKSLLLILLVLAVLMPLLAIFWRGFSGEAGQGGGLLAARELFTSASFHWL-LGNSLSV 87
           +G K+ +L+LL   V  PLL +F    +  A      + A  L  S +  WL L N++ +
Sbjct: 39  LGLKAAVLVLLTALVAAPLLKVFGATLAPGAWSAWSDVLASNL--SRNLFWLPLANTMIL 96

Query: 88  AFTVAAIVVPLAYLFAFALQRTLIPAKGLWRGISLLPLLAPSMLPAIALVYLFGNQ---- 143
              VA   V +    A+ +  T +P +     ++ LP + PS   A+A   LF N     
Sbjct: 97  GAGVATGCVLVGGFLAWLVVMTDVPFRRTIGLLATLPFMIPSFATALAWGSLFRNARVGG 156

Query: 144 --GLLRGL-LSDNIYGFWGIVLGEAI---YTFPHALMILLSALSLADARLFDAASSMGAG 197
             G L GL  S   +  WG+V    +   + +  A  ++ +AL+  ++ L +AA   GAG
Sbjct: 157 QIGFLEGLGFSVPDWLAWGMVPTLVVLMAHYYSLAFTVIAAALATVNSDLVEAAQMTGAG 216

Query: 198 SWRAFTSITWPASRQAVFAAFCLVFTLTITDFGVPVVVGGDY--QVLALEAYKAV-VGQQ 254
             R F  I  P +  A+ A   L F   +++F  P ++G     Q LA   Y  + +GQ 
Sbjct: 217 RRRIFLGIVLPVALPALVAGASLTFAGAVSNFAAPALLGLPVRMQTLATRLYGMIEIGQA 276

Query: 255 QFGRGALIGMVLLL-PALFSFTVDAWLRRRQGEAM----GGRAQVFEPKPSR------GR 303
           +  RG ++ ++L+L  A F +  +  +  R+  A     GGR++ F    +R        
Sbjct: 277 E--RGYVLAILLILVSAFFLWAGNRVISGRRSYATITGKGGRSKRFALGTARLPLFVAAA 334

Query: 304 DACFLTIVLLVCAALLVVIGMAVYSS-LVTFWPYNLSLSLRHYMFEDTAGGGW------- 355
             C LT V+ V   +L+   +A  SS L + W  +  +            G W       
Sbjct: 335 SICVLTTVVPV--VILIASSLAPSSSALFSDWSLHYWIGASDPAIARGQAGIWNNPLILS 392

Query: 356 ---LAYRNSVTMAIGTALIGSIVIFTGAYLMEKTQGQRLLNHALRLLSFIPMAVPGLVLG 412
              +     VT+A   +L+G +V F    L     G   L+ A+  +SF+P+ VPG+  G
Sbjct: 393 ATGVTVGLGVTVAFSASLVGLLVAFV---LARSRSG--FLSAAINQISFLPLLVPGIAFG 447

Query: 413 LGYVFFFNLNGNPLHVLYGGMGLLVVCTIAHYLTTAQMTATTALRQLDGEFEAAALSLKA 472
             YV        PL  LYG   LLV+   A+ +  A  T    ++Q+ G+ + +A    A
Sbjct: 448 AAYVALLGAPIGPLPALYGTFLLLVIAATAYLVPFAVQTGRAVIQQVSGDLDESARMTGA 507

Query: 473 PLYKHFLRVTVPICLPALLDIIRYLFVSAMTTVSAAIFLYSPDTLLAAIAVLNMDDAGNV 532
              +    +TVP+ +  L      +FV  +  +S  + L++P   L ++        G  
Sbjct: 508 GFLRRLFAITVPLAIRGLSAGALIVFVKIVRDLSLVVLLFTPTMPLLSVLAYRYASDGFT 567

Query: 533 GGAAAMSTLILLTSAGASLLLAAASRGLLRRSQAWRQ 569
             A A++ ++L+ S  A+L     +  L  +SQ W Q
Sbjct: 568 QFANALTVVVLVISVAATLF----ANRLQAKSQPWLQ 600