Pairwise Alignments

Query, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 589 a.a., spermidine/putrescine ABC transporter permease from Klebsiella michiganensis M5al

 Score =  107 bits (268), Expect = 1e-27
 Identities = 138/576 (23%), Positives = 236/576 (40%), Gaps = 61/576 (10%)

Query: 32  KSLLLILLVLAVLMPLLAIFWRGFSGEA----GQGGGLLAARELFTSASFHWLLGNSLSV 87
           + +++++  LA+ +PLL I  + F         +   L A   +F+   F+  L +   +
Sbjct: 13  RGIIVVMTALAIYVPLLFIVVQSFLSAPFFARSKSFSLEAFAFIFSDPDFYLALKSGFIL 72

Query: 88  AFTVAAIVVPLAYLFAFALQRTLIPAKGLWRGISLLPLLAPSMLPAIALVYLFGNQGL-- 145
           AF + AI +PL  + AF + RT +P +     + L+P+    M+     V   G  G   
Sbjct: 73  AFGLVAIAIPLGGILAFLMVRTDLPGRRFIEPLILVPIFVSPMVLGFGYVVAAGPVGFFS 132

Query: 146 -----LRGLLSDNIYGFWGIVLGEAIYTFPHALMILLSALSLADARLFDAASSMGAGSWR 200
                L G +  NIY  + IV+   +   PHA + + SAL    + + +AA ++GA   +
Sbjct: 133 QWAEQLIGFVPWNIYSMFSIVVIAGLTHVPHAYLYISSALRSVGSDVEEAARTVGASPLQ 192

Query: 201 AFTSITWPASRQAVFAAFCLVFTLTITDFGVPVVVGG--DYQVLALEAYKAVVGQQQFGR 258
             T+++ P  R ++  A  L+F L +  FG+ +V+G      VLA   YK      + G 
Sbjct: 193 VMTAVSLPMVRPSILYACVLLFFLGLEVFGLMLVLGDPEGNMVLATYLYKLT---NKLGT 249

Query: 259 GALIGMVLLLPALFSFTVDAWLRRRQGEAMGGRAQVFEPKPSRGRDACF----LTIVLLV 314
            +   M  +   L   T+   + +R+      R    + K S+ R            ++V
Sbjct: 250 PSYHLMAAVAVVLICITIPLVMLQRRLMRTANRFVTMKGKASQARALPLGKWRWVAGIVV 309

Query: 315 CAALLVVIGMAVYS----SLVTFWPYNLS----LSLRHYMFEDTAGGGWLAYRNSVTMAI 366
            A L V IG+ +      + ++ W   +S    LSL  +           A  NS+ + +
Sbjct: 310 VAWLTVTIGVPLLGVALRAFISNWGVGVSLWDELSLATFRSIWQQPNLLRAIVNSMAIGV 369

Query: 367 -GTALIGSIVIFTGAYLMEKTQG-QRLLNHALRLLSFIPMAVPGLVLGLGY--VFFFNLN 422
            G AL     +F G  +  K     R L++++     +P AVPGL+ GL +  VF F   
Sbjct: 370 FGGALAVVCYLFVGIAMHRKPDNVTRFLDYSV----LVPRAVPGLLAGLAFLWVFLFLPM 425

Query: 423 GNPLHVLYGGMGLLVVCTIAHYLTTAQMTA------------------------TTALRQ 458
                +  G +  L V          Q+ A                        ++ L Q
Sbjct: 426 WLDQSLKNGWLSALPVADWLREHLIVQLRALRNTIFSVWLAYTVVWMAYGLRLISSTLLQ 485

Query: 459 LDGEFEAAALSLKAPLYKHFLRVTVPICLPALLDIIRYLFVSAMTTVSAAIFLYSPDTLL 518
           +  E E AA S  A   +    VTVP+    L+     +F+      S  ++L SP T  
Sbjct: 486 VAPELEEAARSTGASRGQITRHVTVPLSRYGLIGSWLLMFLIFEREYSTGVYLLSPGTET 545

Query: 519 AAIAVLNMDDAGNVGGAAAMSTL-ILLTSAGASLLL 553
               ++++  AG +   AA+S + ILL   G  + L
Sbjct: 546 IGSMLVSLWAAGAIDIVAALSFINILLVVVGLGIAL 581