Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 13/141 (9%)

Query: 147 SWQDLTKPEYKGKIVMPNP-------ASSGTGFLDVSAWLQTFGEPQGWAYMDALHQNIG 199
           SW DL KPE KG++++ +        A    G+   S   +   E   +A +  L  N+ 
Sbjct: 149 SWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDE--AYAELQKLMPNV- 205

Query: 200 QYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDIVLPKE-GLGWEIEATAVIKG 258
             V +   P     +GE  +G+ +   A   +++G P+ +V PKE G+GW ++  A+  G
Sbjct: 206 -LVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGW-VDNFAISSG 263

Query: 259 SPKADVAKRLADFSASPAAME 279
           +   D A ++ DF   P   E
Sbjct: 264 AKNVDAAHKMIDFLLRPEIAE 284