Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  131 bits (329), Expect = 3e-35
 Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 14/339 (4%)

Query: 3   KHLALAVAVSAVFSLQASAADTQLTVYTALEAEQLKTYKQA----------FEKANPDIE 52
           K+L   +A+  V ++   A  T+       + EQ+ T   A          FEK +  I+
Sbjct: 2   KNLKGILAIFCVMAVLVFAGCTEQQASNVSQEEQIVTVYVAYGSLDLIADEFEK-DTGIK 60

Query: 53  IKWVRDSTGIITAKLLAEKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLGKISGNYR 112
           +++V  S+G   ++L AE+  P AD   G    +     Q+G+LEAY   +   I   + 
Sbjct: 61  MEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSPNAKDIDPLFV 120

Query: 113 DAANPPAWVGMDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGF 172
           +      W G+ +    I  NT    ++GL +P +W DL   +YKG+++  NP  SGT +
Sbjct: 121 EEDG--YWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASNPTVSGTAY 178

Query: 173 LDVSAWLQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKR 232
             +   LQ +GE +GW Y+D  +QN       GS P  L  AGE+  G++ +     +  
Sbjct: 179 FTICGILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAPDPHTTVIAD 238

Query: 233 QGAPLDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLAAPG 292
              P+  V   + + W     +++ G+   + AK   D+  S    E+  +    +   G
Sbjct: 239 SELPVKSVFLNKVIWWP-SPVSIVSGAKHPENAKIFVDWCLSKEGQEVLMQASPRVPVRG 297

Query: 293 IAKPQTELPADYEQRLIKNDFVWASKNRDQILAEWRKRY 331
             +    +P   +   +  DF++  +NRD+IL EW  RY
Sbjct: 298 DIEVIEGVPNPKDLDFLDMDFMYWGENRDRILDEWESRY 336