Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score =  129 bits (324), Expect = 1e-34
 Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 6/312 (1%)

Query: 20  SAADTQLTVYTALEAEQLKTYKQAFEKANPDIEIKWVRDSTGIITAKLLAEKERPQADAV 79
           S  +  +TVY A  +  L      FEK +  I++++V  S+G   ++L AE+  P AD  
Sbjct: 31  SQEEQVVTVYVAYGS--LDLIADEFEK-DTGIKMEYVSLSSGEALSRLKAEQSNPSADVW 87

Query: 80  WGLAASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPAWVGMDVWAATICFNTIEAEK 139
            G    +     Q+G+LEAY   +   I   + +      W G+ +    I  NT    +
Sbjct: 88  LGGGIDAFISAQQDGLLEAYKSPNAKDIDPLFVEEDG--YWTGVSLVTIGILENTDLLSE 145

Query: 140 QGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEPQGWAYMDALHQNIG 199
           +GL +P +W DL   +YKG+++  NP  SGT +  +   LQ +GE +GW Y+D  +QN  
Sbjct: 146 KGLPQPQTWDDLITDDYKGELIASNPTVSGTAYFTICGILQMYGEDEGWNYLDKFYQNTP 205

Query: 200 QYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDIVLPKEGLGWEIEATAVIKGS 259
                GS P  L  AGE+  G++ +     +     P+      + + W     +++ G+
Sbjct: 206 FLTKRGSGPGNLVTAGEYAYGVAPDPHTTLIADSELPVKSAFLNKVIWWP-SPVSIVNGA 264

Query: 260 PKADVAKRLADFSASPAAMELYKENFAVLAAPGIAKPQTELPADYEQRLIKNDFVWASKN 319
              + AK   D+  S    E+  +    +   G  +    +P   +   +  DF++  +N
Sbjct: 265 KHPENAKIFVDWCLSKEGQEVLMQASPRVPVRGDIEVIDGVPNPKDLDFLDMDFMYWGEN 324

Query: 320 RDQILAEWRKRY 331
           RD+IL EW  RY
Sbjct: 325 RDRILDEWESRY 336