Pairwise Alignments

Query, 398 a.a., ribosomal RNA large subunit methyltransferase I from Pseudomonas putida KT2440

Subject, 400 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase from Klebsiella michiganensis M5al

 Score =  216 bits (549), Expect = 1e-60
 Identities = 139/398 (34%), Positives = 211/398 (53%), Gaps = 10/398 (2%)

Query: 4   PSLRLKANADRRLRAGHLWVYSNEVDVSATPLQG-FQAGQQAILEAANGKPLGIVALSPN 62
           P L L    ++ L   H W++S  V      ++G  ++G+   +  + GK L   A SP+
Sbjct: 7   PRLVLTKGREKSLLRRHPWIFSGAV----ARMEGKARSGETIDIVDSQGKWLARGAYSPS 62

Query: 63  NLICARLLSRDIKLPLDKSLLVHRLNVALSLRERLFEQP---CYRLVYGDSDLLPGLVVD 119
           + I AR+ S D    +D +    RL  A + RE L  +     YRL+ G+SD LPG+ +D
Sbjct: 63  SQIRARVWSFDRDEAIDNAFFERRLQQAQTWREWLAARDGLDSYRLIAGESDGLPGVTID 122

Query: 120 RFFDILVVQLASATMEAHKDDVIAALVQVLKPSGILFKNDSAARDAEGLQRYVETVYGEV 179
           RF D  V+QL SA  E  +  +++AL  +     I  ++D A R  EGL+     V GE+
Sbjct: 123 RFGDFFVLQLLSAGAEYQRAAIVSALQTLFPNCAIYDRSDVAVRKKEGLELAQGPVVGEL 182

Query: 180 PD-WVPLEENGVKFEAPVREGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQA 238
           P   +P+ E+G++    ++ G KTG++ D R +R     YV  KRVL+ FSY GG+ + A
Sbjct: 183 PPALLPITEHGMQLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFAISA 242

Query: 239 GAFGASEVFCVDASGFALDGVERNAALNGIS-EKLTCIEGDVFEALRELKAAEERFDVII 297
              G  +V  VD S  ALD   +N  LN +   K   I  DVF+ LR+ + A E+FDVI+
Sbjct: 243 LMGGCRQVVSVDTSQEALDVARQNVELNKLDLSKAEFIRDDVFKLLRKYRDAGEKFDVIV 302

Query: 298 ADPPAFIKRKKDLKNGEAAYRRLNEQAMRMLNKDGILVSASCSMHLPEDDLNNILLTSAR 357
            DPP F++ K  L      Y+ +N  A+++LN  GIL++ SCS  +  D    I+  +A 
Sbjct: 303 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMTTDLFQKIVADAAL 362

Query: 358 HLDRNMQLLERGGQGPDHPVHPAIAETRYIKSITCRLL 395
              R++Q +E+  Q  DHPV     E  Y+K   CR++
Sbjct: 363 DAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRIM 400