Pairwise Alignments

Query, 494 a.a., Signal Recognition Particle protein translocation receptor GTPase from Pseudomonas putida KT2440

Subject, 496 a.a., signal recognition particle subunit FFH/SRP54 (srp54) from Synechococcus elongatus PCC 7942

 Score =  167 bits (423), Expect = 8e-46
 Identities = 96/277 (34%), Positives = 147/277 (53%), Gaps = 11/277 (3%)

Query: 222 DLLDEIETRLLTADVGVEATSAIVQNLTQKVARKQLADA----DALYKSLQEELAALLRP 277
           + L E+   LL ADV +      +  + +K    Q+           K + +EL  ++  
Sbjct: 40  EALKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGE 99

Query: 278 VEQPLNVQAQNKPYVILVVGVNGAGKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQL 337
              PL  QA   P VIL+ G+ GAGKTT   KLA  L+ EG+  +L A D +R AA++QL
Sbjct: 100 THVPL-AQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQL 158

Query: 338 QVWGERNQIPVIAQHTGADSASVIFDAVQAAKARGVDVLIADTAGRLHTKDNLMEELKKV 397
              G++  +PV    + A+   +    V+ A+  G+D +I DTAGRL     +MEEL +V
Sbjct: 159 ITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQV 218

Query: 398 RRVIGKLDVEAPHEVLLVLDAGTGQNAISQAKYFNQSVELTGLALTKLDGTAKGGVIFAL 457
           +  I      APHEVLLV+D+  GQ A S  + F++ + +TG  LTKLDG ++GG   ++
Sbjct: 219 KEAI------APHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSI 272

Query: 458 AKQFNIPIRFIGVGEGIDDLRTFEAEPFVKALFAERD 494
            +    PI+F+G+GE ++ L+ F  E     +    D
Sbjct: 273 RRVSGQPIKFVGLGEKVEALQPFHPERMASRILGMGD 309