Pairwise Alignments

Query, 494 a.a., Signal Recognition Particle protein translocation receptor GTPase from Pseudomonas putida KT2440

Subject, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  155 bits (392), Expect = 3e-42
 Identities = 93/278 (33%), Positives = 145/278 (52%), Gaps = 12/278 (4%)

Query: 222 DLLDEIETRLLTADVGVEATSAIVQNLTQKVA----RKQLADADALYKSLQEELAALLRP 277
           + L E+   LL ADV +      V N+ ++       K L+   A  K +Q EL   +  
Sbjct: 29  ETLREVRMALLEADVALPVVREFVNNVKERAVGQEVAKSLSPGQAFIKIVQSELEKSMGE 88

Query: 278 VEQPLNVQAQNKPYVILVVGVNGAGKTTTIGKLAKKLQLEGKK-VMLAAGDTFRAAAVEQ 336
             Q L++  Q  P V+++ G+ GAGKTT++ KL K L+   KK V++ + D +R AA++Q
Sbjct: 89  ANQALDLATQ-PPAVVMMAGLQGAGKTTSVAKLGKLLRTRHKKSVLVVSADVYRPAAIKQ 147

Query: 337 LQVWGERNQIPVIAQHTGADSASVIFDAVQAAKARGVDVLIADTAGRLHTKDNLMEELKK 396
           L+       +             +   A+  AK + +DV+I DTAGRLH  + +M+E+K 
Sbjct: 148 LETLATEVDVEFFPSDVSQKPIDIAKAAIAHAKLKFIDVVILDTAGRLHVDEAMMDEIKA 207

Query: 397 VRRVIGKLDVEAPHEVLLVLDAGTGQNAISQAKYFNQSVELTGLALTKLDGTAKGGVIFA 456
           +   +       P E L V+DA TGQ+A + AK FN+++ LTG+ LTK+DG A+GG   +
Sbjct: 208 LHAAL------KPIETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALS 261

Query: 457 LAKQFNIPIRFIGVGEGIDDLRTFEAEPFVKALFAERD 494
           +      PI+F+GVGE  D L  F  +     +    D
Sbjct: 262 IRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGD 299