Pairwise Alignments

Query, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

Subject, 767 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  185 bits (469), Expect = 1e-50
 Identities = 101/289 (34%), Positives = 168/289 (58%), Gaps = 6/289 (2%)

Query: 21  LGVSGAFLYLSPSLPSVESLRSIQLQIPLRVYSSDGKLIAEFGEMRRSPIRFAEIPPQFI 80
           +GV G  LY    +PS  S    +    +++ +++G +IA  G      +   ++ P   
Sbjct: 106 IGVGGLVLYYGARMPSATSWSIPERPPNVKILAANGDIIANRGATGGEAVALEDMSPYIP 165

Query: 81  QALLSAEDDNFLNHYGVDPSSLMRAATQLVKTGHIQTGGSTITMQVAKNFFLTSERSFSR 140
           QA+++ ED  F +H+GVDP  L RA    V +G +  GGST+T Q+AKN FL+ ER+  R
Sbjct: 166 QAVIAIEDRRFYSHFGVDPLGLARAMLTNVMSGRMVQGGSTLTQQLAKNLFLSPERTLER 225

Query: 141 KTNEILLALQIERELTKDEILELYVNKIYLGNRAYGIDAAAQVYYGKSIRDVSLAQMAMI 200
           K  E+LLA  +E++ TKD+IL +Y+N+++ G+ AYG++AA++ Y+ KS RDV+L + A++
Sbjct: 226 KVQEVLLAFWLEQKYTKDQILAMYLNRVFFGSNAYGVEAASRRYFNKSARDVNLGEAALL 285

Query: 201 AGLPKAPSRFNPLANPVRAKERRDWILGRMYKLGKIDQASYEAALAE-PLNASYHVPTPE 259
           AGL KAPSR +P  +P  A+ER   +LG M + G I  +  + A+++ P  A       E
Sbjct: 286 AGLLKAPSRLSPARDPEAAEERAQLVLGAMREEGFISDSEIKTAMSQAPTRAKSFWSGAE 345

Query: 260 VNAPYIAEMARAEMVGRYGSDAYTEGFRVTTTVPSDMQEMANKAVLKGL 308
               Y+A+M   ++ G  G    T+   + TT+   +++ A + + + L
Sbjct: 346 ---HYVADMVMDQVPGMIGE--VTQDLVIDTTIDLTLEKKAEEVLAERL 389



 Score =  165 bits (418), Expect = 8e-45
 Identities = 123/403 (30%), Positives = 191/403 (47%), Gaps = 74/403 (18%)

Query: 422 AQSALVTLDPNNGAIRALVGGFSFEQSNYNRAVQAKRQPGSSFKPFIYSAALDSGYTASS 481
           +Q+ALV++D   GAIRALVGG  + +S ++RA +AKRQPGS+FKPF+Y+AAL+ G T  S
Sbjct: 399 SQAALVSID-GTGAIRALVGGRDYAESQFDRASKAKRQPGSAFKPFVYAAALEIGRTPMS 457

Query: 482 LVNDAPIVFVDESVDKVWRPKNDTNTFLGPIRMREALYKSRNLVSIRLLQAMGVDRTIDY 541
           + NDAP+   +      W P+N    + G + + +AL  S N ++ +L+  +G    +  
Sbjct: 458 VRNDAPVRIGN------WTPENYDQKYRGEVTLADALANSLNTIAAQLVMEVGPQNVVKL 511

Query: 542 IAKFGFNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKITPYLIERIESRSGETLF 601
             + G +  D+  N S+ALGT+ +T +E+ + ++ F NGG+K TP++I RI +  G  L+
Sbjct: 512 AHRLGID-SDMQANASIALGTSEVTLVELTSSYAPFMNGGFKATPHVIRRISTADGTVLY 570

Query: 602 T---ANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAFSQVAAASQAPAVAEQIIDGR 658
                NP RV                                       PA+  +     
Sbjct: 571 ENTYDNPPRVLD-------------------------------------PAIVSE----- 588

Query: 659 TTYILTSMLQDVIKRGTGRRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTTVWVGFD 718
               +  M+  V+  GTG+ A   G  + AGKTGTT   +DA F GY ++  T +W G D
Sbjct: 589 ----MNRMMVRVLTDGTGKNARLPG-WEAAGKTGTTQSFRDALFVGYTSNLATGIWFGND 643

Query: 719 QPETLGRREYGGTAALPIWMNFMGAA---LKDKPAHAPA------EPEGILSLRVDPVSG 769
             + + ++  GG      W +FM AA   L   P           +  GI +    P  G
Sbjct: 644 DGKFM-KKVTGGGLPARAWHDFMVAAHEGLSPSPLFGTTGVQPVFDEGGIAAAGEMPADG 702

Query: 770 RAAS-----PSTPNAYFELFKAEDSPPSVDELGNGAAPGSPLP 807
             A      P  P A  +  ++ D   +VD++      G P+P
Sbjct: 703 FDAGSPDVFPERP-AGMDGVESMDGMAAVDQVRPAEQAGGPIP 744