Pairwise Alignments

Query, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

Subject, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

 Score =  169 bits (427), Expect = 7e-46
 Identities = 115/313 (36%), Positives = 173/313 (55%), Gaps = 19/313 (6%)

Query: 15  VICALVLGVSGAFLYLSPSLPSVESLRSIQLQIPLRVYSSDGKLIAEFGEMRRSPIRFAE 74
           V+ AL + V    LY  P  PS +        I      ++G ++A  G     P+  AE
Sbjct: 45  VVLALGVLVLAINLYTMPLSPSFQEPERSGFLIA----DAEGTVVATRGVTAGRPVALAE 100

Query: 75  IPPQFIQALLSAEDDNFLNHYGVDPSSLMRAATQLVKTGHIQTGGSTITMQVAKNFFLTS 134
           +P   + A+++ ED  F +H+GVDP  + RA    +++G    G ST+T Q+ KN  LT 
Sbjct: 101 MPASLVNAVIAFEDRRFRDHWGVDPRGIARAIWVNLRSGGRTQGASTLTQQLVKNTLLTP 160

Query: 135 ERSFSRKTNEILLALQIERELTKDEILELYVNKIYLGNRAYGIDAAAQVYYGKSIRDVSL 194
           E++F+RK  E +LAL IER+LTKDEILE Y+N +YLG  +YG+DAAA+ Y+ K + D+SL
Sbjct: 161 EKTFTRKIQEAMLALWIERKLTKDEILERYLNSLYLGAGSYGVDAAARRYFNKPVTDLSL 220

Query: 195 AQMAMIAGLPKAPSRFNPLANPVRAKERRDWILGRMYKLGKIDQASYEAALAEPLNASYH 254
           A+ AMIAGL +AP+R  P      A++R + +L  M   G I   + EA  A+   AS  
Sbjct: 221 AESAMIAGLIQAPARTGPTTALDVARQRAELVLDVMRDQGLI--GADEATWAKAHPASLA 278

Query: 255 VPTPEVNA-----PYIAEMARAEMVGRYGSDAYTEGFRVTTTVPSDMQEMANKAVLKGLS 309
           VP  E+ A      +IA+ AR + +G    D     F V +T+   +Q +A + + +G++
Sbjct: 279 VPPVELPAYGAVSDWIADEAR-KALGPLSGD-----FLVVSTLDRRLQVLAQQTIQEGMA 332

Query: 310 DYDERHGYRGPEA 322
              E  G R  +A
Sbjct: 333 --AEGAGLRATQA 343



 Score =  127 bits (319), Expect = 2e-33
 Identities = 114/358 (31%), Positives = 165/358 (46%), Gaps = 65/358 (18%)

Query: 423 QSALVTLDPNNGAIRALVGGFSFEQSNYNRAVQAKRQPGSSFKPFIYSAALDSGYTASSL 482
           Q+ALV + P+ G + A+VGG  +++S +NRAVQA+RQPGS FK F+Y  AL + +     
Sbjct: 342 QAALVAMAPD-GRVLAMVGGRDYQESQFNRAVQARRQPGSIFKLFVYLTALSNNWRPDDP 400

Query: 483 VNDAPIVFVDESVDKVWRPKN-DTNTFLGPIRMREALYKSRNLVSIRLLQAMGVDRTIDY 541
           ++D P+     ++D  W P+N       G + +R A   S NL ++RL +A+G +  I  
Sbjct: 401 IDDTPL-----TIDG-WSPENYGGGAGHGSVPLRVAFAHSYNLAAVRLQEAVGREAVIAT 454

Query: 542 IAKFGFNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKITPYLIERIES-RSGETL 600
               G  K DL    SLALGT   T +++ + ++  A     + P +IE + +  SGE  
Sbjct: 455 ARSMGL-KDDLQPLPSLALGTFPATLLDLTSAFAAVAADRATVQPRVIEVLRTPGSGE-- 511

Query: 601 FTANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAFSQVAAASQAPAVAEQIIDGRTT 660
                 R P                               V  + +AP      +D    
Sbjct: 512 -----IRPP-------------------------------VRQSGRAPWPRASALD---- 531

Query: 661 YILTSMLQDVIKRGTGRRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTTVWVGFDQP 720
                +L  V+ +GTG RA ALG     GKTGTT +++DAWF G+  + V  VWVG D  
Sbjct: 532 -----LLNAVVTQGTG-RAAALG-VPTYGKTGTTQDNRDAWFIGFAGNLVIGVWVGNDD- 583

Query: 721 ETLGRREYGGTAALPIWMNFMGAALKDKPA-HAPAEPEGILSLRVDPVSGRAASPSTP 777
           ET      GG     +W +F   AL    A  APA P    +    P    AA+P  P
Sbjct: 584 ETPMTGISGGGLPAKLWQSFAARALAGGVAGSAPAAPIAAATTATLP----AAAPPAP 637