Pairwise Alignments

Query, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

Subject, 578 a.a., type IV pilus secretin PilQ from Vibrio cholerae E7946 ATCC 55056

 Score =  306 bits (783), Expect = 1e-87
 Identities = 175/417 (41%), Positives = 256/417 (61%), Gaps = 31/417 (7%)

Query: 16  QGEPLSLNFQDVEVRAVLQVLADYAGVNLVASDAVQGSVTLRLQDVPWDQALDLVLRSKG 75
           +G+ +S+NFQD+ VR VLQ++ADY G NLV SD+V G++TLRL  VPW Q LD++L+ KG
Sbjct: 162 EGKLISINFQDIPVRNVLQLIADYNGFNLVVSDSVVGNLTLRLDGVPWQQVLDIILQVKG 221

Query: 76  LSRRQEGNVLLVAPAAEFAAQSADARVSQALDAHLQPLRRELLPIHHAKAADLAQLLLAG 135
           L +R +GNV+L+AP  E   +   A     L   L  L+ E++ I+ AKA+D+A ++  G
Sbjct: 222 LDKRVDGNVILIAPKEELDLREKQALEKARLAEELGDLKSEIIKINFAKASDIAAMI--G 279

Query: 136 LEGDG---IPPASLSVDERTNTLVVHLPADRLAEMRQLVAQLDVPVRQVAIEARIVEANV 192
            EG+        S+S+DERTN+L++    D +A +R+++  LD+PV+QV IEARIV    
Sbjct: 280 GEGNVNMLSERGSISIDERTNSLLIRELPDNIAVIREIIESLDIPVKQVQIEARIVTVKE 339

Query: 193 DYEKSLGVRWG---------------------GPLYGEKLRPGKELFVDLGLERAGSS-- 229
              + LGVRWG                     G L  ++    + L V+L    A +S  
Sbjct: 340 GNLEELGVRWGVMSTNGSHSVGGSIESNLWQKGLLADDEFPVDEFLNVNLASTSANASSI 399

Query: 230 -IGLGLLRGDVLLDLELSAMEKSGNGEIISQPKVVTADKETARILKGTEVPYQETSQSGA 288
              +  L    LLDLELSA++     EIIS P+++T +K+ A I +GTE+PY E+S SGA
Sbjct: 400 AFQVAKLGSGTLLDLELSALQNESKAEIISSPRLITTNKQPAYIEQGTEIPYLESSSSGA 459

Query: 289 TSVSFREASLSLEVTPQITPDNKVIMTVRVTKDE--PDYVNALNNVPPIRKNEVNAKVRV 346
           ++V+F++A LSL+VTPQITPDN++++ + VT+D               I    +  +V V
Sbjct: 460 STVAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRRGETVKTGTGEAVSIDTQRIGTQVLV 519

Query: 347 ADGETIVIGGVYSTSQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIM 403
            +GET+V+GG++  S NN VDKVP  GDLP +G LFRR   Q  KSELL+F+TP+++
Sbjct: 520 NNGETVVLGGIFQHSINNSVDKVPLLGDLPVLGALFRRTYEQMGKSELLIFVTPKVV 576