Pairwise Alignments

Query, 425 a.a., efflux transporter from Pseudomonas putida KT2440

Subject, 392 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  361 bits (926), Expect = e-104
 Identities = 183/378 (48%), Positives = 256/378 (67%)

Query: 33  IEKGTPAFMKTVLALFSGGFATFALLYCVQPMMPLLSREFAINAAQSSLVLSVSTAMLAF 92
           + +GTPA+ +  LALF  GFATFALLYC+QP++P+L+  F+++AA SSL LS++T  LA 
Sbjct: 8   LRRGTPAYRRATLALFCAGFATFALLYCIQPLLPMLAAHFSVSAASSSLALSLTTLSLAL 67

Query: 93  GLLITGPISDRIGRKPVMVFALVCAALSTLASAVMPSWELVLATRALVGLSLSGLAAVAM 152
            LLI+G +++  GRKPVM  AL  A+L  LAS ++ SW+L+LA RAL+GL+LSGL A+AM
Sbjct: 68  CLLISGALAESWGRKPVMAAALGLASLLGLASVLVDSWQLLLALRALLGLALSGLPALAM 127

Query: 153 TYLSEEIHPQHIGLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTAMLTIGGLALVAALV 212
            Y+ EE  PQ +  AMGLYIGG A+GGM GRL++G+L D   W  A+  I  L L+A  +
Sbjct: 128 AYVGEEFEPQSLPAAMGLYIGGTALGGMLGRLLSGLLSDLGGWQLALGGIASLGLLALAL 187

Query: 213 FWKVLPESRNFRAQTMNPRSLLDGFVMHFKDAGLPWLFLEAFLLMGAFVTLFNYIGYRLL 272
           F  +LP SR+F+AQ ++ R+LL  F +H ++  L  LFL+ FLLMG FV LFNYIG+RL 
Sbjct: 188 FVWLLPASRHFKAQPLSLRNLLANFRLHLRNPTLRSLFLQGFLLMGGFVALFNYIGFRLA 247

Query: 273 AEPYHMNQALVGLLSVVYLSGIYSSAQVGALADKLGRRKVFWASIVVMAVGLLMTLASPL 332
            EP+ ++  L+GLL VVYL GI+S+   G L  + G R+V    +V+M +G+ +     L
Sbjct: 248 GEPFGLSSTLIGLLFVVYLGGIFSAGWAGRLVPRFGARQVLRGGVVLMLLGVGLCATPWL 307

Query: 333 VMVIVGMLVFTFGFFGAHSVASSWIGRRALKAKGQASSLYLFCYYAGSSVAGTAGGVFWH 392
             +++G+ +FT GFF AH+VAS  +G  A +A+ QAS+LYL  YY GSSV G   G  W 
Sbjct: 308 AAIVLGLGLFTLGFFAAHAVASGQVGSHAKQARAQASALYLCAYYLGSSVVGYGAGYVWD 367

Query: 393 QWGWNGIGLFIGSLLAVA 410
             GW  +   + +L  +A
Sbjct: 368 HAGWLPLMALLAALFVIA 385