Pairwise Alignments

Query, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  166 bits (420), Expect = 6e-46
 Identities = 108/293 (36%), Positives = 162/293 (55%), Gaps = 7/293 (2%)

Query: 2   ELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEAG 61
           EL  LR F  VA EL+F RAA++L ++QPPLS+QIQ LE  LG  LF R+ R V L+ AG
Sbjct: 3   ELAQLRCFTTVATELNFRRAAERLNMTQPPLSRQIQLLEHHLGVELFTRSTRSVALTAAG 62

Query: 62  RLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPAV 121
           R F  EA+ +L Q ++AA  ARR   G++G + I F  SA +   +PK I   R + P V
Sbjct: 63  RAFFIEAQNLLEQAQQAAIAARRFAQGDIGSVTISFVGSAVY-EFLPKVIAEARLKQPQV 121

Query: 122 HLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGTE 181
            + L EM++    E +    I++G++R   L  G     L REP V  + A HPLA  + 
Sbjct: 122 KIVLAEMNTYQQHEALRARRIDLGIVRSPLLETGYATECLVREPFVLAVPAGHPLA--SA 179

Query: 182 QGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGLG 241
           + V +  L  +PF+ +  +     +  L  + R A  +P F Q  G ++TI+ LV+AG+G
Sbjct: 180 ETVSVQDLDAQPFLMYSHAAYPPFNELLTGMLRSARVAPQFVQWLGSSLTILALVNAGMG 239

Query: 242 VSVLPASFQRMRIEGVVYRTL-LDEEAMTAVWLVQRERGHSVMAKAFAELLTG 293
           ++++P     +  + VV+R + L E   + + LV R+   +    AF  LL G
Sbjct: 240 LALVPRCASSVVFKQVVFREIDLGEGVQSELHLVWRQDNDN---PAFTMLLEG 289