Pairwise Alignments

Query, 486 a.a., conserved protein of unknown function, UPF0061 family from Pseudomonas putida KT2440

Subject, 484 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  435 bits (1119), Expect = e-126
 Identities = 235/476 (49%), Positives = 314/476 (65%), Gaps = 14/476 (2%)

Query: 20  FSTQVLPEPIADPRLVVASESAMALLDLDPAQAELPVFAELFSGHKLWEEADPRAMVYSG 79
           F +QV P+ I++P  +  S+ A AL+ L     EL    +  SG+   E A   A VYSG
Sbjct: 14  FYSQVYPQGISNPHWLAWSDDAAALIGLHQPTDEL---LQGLSGNAAVEGASYYAQVYSG 70

Query: 80  HQFGSYNPRLGDGRGLLLAEVLNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLA 139
           HQFG Y PRLGDGR ++L E +   G  WD+ LKG G TPYSR GDGRAV+RS++REFL 
Sbjct: 71  HQFGGYTPRLGDGRSIILGEAIGPNGA-WDVALKGGGPTPYSRHGDGRAVMRSAVREFLV 129

Query: 140 SEALHALGIATSRALCVIGSSTPVWRETRESAAMLTRLAQSHVRFGHFEYFYYTKQPEQQ 199
           SEALH LG+ T+RAL VIGS  PVWRE++E+AA+  RLA+SH+RFGHFE+F ++++ +  
Sbjct: 130 SEALHHLGVPTTRALAVIGSDMPVWRESQETAAITVRLARSHIRFGHFEFFSHSERGQAD 189

Query: 200 RV--LIDHVLEQHYPECREAEQPYLAMFRTIVERNAELIARWQAYGFCHGVMNTDNMSIL 257
           ++  L++  L+QHYP        Y A F  +V+ +A++IA WQA GF HGVMNTDNMSIL
Sbjct: 190 KLTQLLNFTLKQHYPHLSCDPAGYKAWFLQVVQDSAKMIAHWQAIGFAHGVMNTDNMSIL 249

Query: 258 GITFDFGPYAFLDDFDANFICNHSDDRGRYSYANQVPIAHWNLSALAQALTTVIEVEPLK 317
           G +FDFGP+AFLD F  +FICNHSD  GRY++  Q  I  WNL  LAQALT VI  + L 
Sbjct: 250 GDSFDFGPFAFLDTFQEDFICNHSDPDGRYAFGQQPGIGLWNLQRLAQALTPVIASDDLI 309

Query: 318 EALGLFLPLYQAHYLDLMRRRLGL-----TTAEDD--DMVLVERLLQCMQRGGVDYSLFF 370
            AL  +      HYL LMR +LGL     ++AE D  D+ L+ R    M++  +DYS  +
Sbjct: 310 AALNQYQHALVQHYLALMRAKLGLVQQADSSAEQDQQDLELIGRFTVLMEKNQLDYSHTW 369

Query: 371 RKLGEQPVAEALKVARDDFIDLAGFDAWGADYLARCGREPGNAEGRRERMHAVNPLYVLR 430
           R+ G+   +      RDDFIDL  FDAW   Y AR G+   + E  +++ + VNP Y+LR
Sbjct: 370 RRFGQLDPSSLHSSLRDDFIDLNEFDAWYQVYQARLGKVT-DVEAWQQQCNRVNPKYILR 428

Query: 431 NYLAQKAIEAAEAGDYSEVRRLHQVLARPFEEQPGMQAYAERPPEWGKHLEISCSS 486
           NYLAQ+AI A + G+ ++++RLHQVL +PF EQ   +  A+RPP+WG+ L +SCSS
Sbjct: 429 NYLAQEAIIAVDEGNLAQLQRLHQVLRQPFTEQIEHEELAKRPPDWGQGLIMSCSS 484