Pairwise Alignments

Query, 565 a.a., choline dehydrogenase from Pseudomonas putida KT2440

Subject, 531 a.a., Choline dehydrogenase and related flavoproteins from Pseudomonas stutzeri RCH2

 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 122/568 (21%), Positives = 190/568 (33%), Gaps = 99/568 (17%)

Query: 1   MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGR 60
           ++ E D  IVG+G+ G T A  L+  AG  VLL+E G      DF  Q         +GR
Sbjct: 27  LTLETDIAIVGSGAGGATSAEVLSA-AGYKVLLIEEGPLRTSGDFDMQ---------EGR 76

Query: 61  RYNWAYETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
            Y   Y+           +   +G+ +GG++L+N     R        WA   G+   + 
Sbjct: 77  AYRSLYQEAIGRTSKDGAITILQGRAVGGTTLVNWTSSFRTPPQTLQHWASEHGVSGLSA 136

Query: 121 LDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNG 180
               P+F + E R           G    T P   NN +     E+  Q       ++ G
Sbjct: 137 ETLQPWFERMEQR----------LGIAPWTVPPNANNAVLQRGCESLGQHWAVIPRNVRG 186

Query: 181 YQQEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKRAIGVTYL 240
               G+  M      N ++S          +    L  ++ A  +R+L  G+R +G+  L
Sbjct: 187 CWNLGYCGMG--CPTNAKQSMLVTSIPAMLENGGELLYLSRA--ERLLMQGERVVGLDCL 242

Query: 241 VGDSEERVEARAR------KEVIVSSGAIASPQLLQRSG-------VGPRALLESLDIPV 287
            G  E  VE          +  I++ G I +P LL RS        VG R  L   +   
Sbjct: 243 -GMDERGVEPNGHRIRVVARHYILAGGGINTPGLLLRSNAPDPHQRVGKRTFLHLTNFSA 301

Query: 288 VHDLPGVGENLQDHLELYLQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTGIGASNQFEA 347
                       + ++ +       P S+Y     W+    G                  
Sbjct: 302 A--------QFDERIDAF----SGAPQSIYSDHFQWHDGVTG-----------------P 332

Query: 348 GGFIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQVKSKDP- 406
            G+     + + P I        +   G    +      H  +M +  R      S +  
Sbjct: 333 AGY-----KLEVPPIHPALATTLLGGFGPQNAQRMAALPHTHAMIALQRDGFHPDSAEGT 387

Query: 407 ---RQHPSILFNYMSTEQDWQEFRDGIRLTREIM--------------AQPALDPYRGRE 449
              R   S + +Y  T+  W   R       EI               A+    P   RE
Sbjct: 388 VELRSDGSPVLDYRMTDYAWNGIRRAFHSMAEIQFAAGARAVLPLHGDARYVRTPRAARE 447

Query: 450 ISPGADVQTDEQLDKFIREHAETAFHPSCSCKMGTDD-MAVVDGEGRVHGMKGLRVVDAS 508
           +  G D+          R H  +A H    C MG D   AV D  GR H +  L + D S
Sbjct: 448 LIEGLDL-------ALYRTHLGSA-HVMGGCAMGEDPRQAVTDSLGRHHQLANLSIHDGS 499

Query: 509 IMPLIITGNLNATTIMIAEKISDKIRGR 536
           + P  I  N   +   +  K++  +  R
Sbjct: 500 LFPTSIGANPQLSIYALCAKLASDLDDR 527