Pairwise Alignments

Query, 321 a.a., transposase from Pseudomonas putida KT2440

Subject, 331 a.a., IS110 family transposase from Klebsiella michiganensis M5al

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 26/315 (8%)

Query: 11  GVDTSKDELVI-----QAAPNTKSFAIPNTPKAIKAWLKTL------PKGSALAIEATST 59
           G+D SK+ L +           K+  I N   +++  L+ L      P+   + +EAT  
Sbjct: 5   GIDVSKNTLDLCMLYDGIKGRIKTRNIQNNRHSVENILRWLRLQHCGPEDVHVVMEATGV 64

Query: 60  YHMEMAEQAHAAGFAVYVIDGLRLSKYRESVAIRAKTDAHDAALLA--RFLSNERGSLKA 117
           YH  +A + H AGF V + +  R  ++   + I  KTD  DA +LA   FL N       
Sbjct: 65  YHERLATELHDAGFYVSLANPHRSREFARGMGIMTKTDKVDAYMLACYAFLKNPH----R 120

Query: 118 WTPPPAGHREIQVLLRRRAKLV--AVR--GMLRMSLSGDKL--FASELKRVEEVLERIEL 171
           W PP    R +  LLRRR  L+  A+R    L   LS D      S    + ++L     
Sbjct: 121 WEPPAPEIRYLGALLRRRDVLLGDALREENRLEKYLSTDTPADIISSCMHMAQLLREEVS 180

Query: 172 SLEKQLRAVIKKA-GLSDQMRRVQRLPGVGFLTAAGLVMSFMRGEFKNSDAFVAYLGMDV 230
           ++E+Q++A IK +  L      +  +  VG      +++     +F +++   A+LG+  
Sbjct: 181 NIERQIKAHIKASPALRRDYTLLTSIKSVGPQLGMHMLVVLRSHDFSSAEQAAAFLGVVP 240

Query: 231 TVSQSG-KWAGRGKLSKRGDSEVRRLLYNASMSGS-RTATWKQYYAHHQARGKKTTQALV 288
              +SG     R ++SK G  ++R  LY +++ G       +  Y     RGK    A+ 
Sbjct: 241 IEKRSGTSVRSRPRMSKIGPPQLRAKLYMSALCGKIYNKRMRNIYDEMCLRGKPKMVAIG 300

Query: 289 ILARRLARLAFGLMR 303
            L R+L    +G+++
Sbjct: 301 ALMRKLVHWCYGVLK 315